RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TUBE1Q9UJT0 475 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 UTP11Q9Y3A2 253 aaKnown RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 ADGRG1Q9Y653 693 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 HARSP12081 509 aaKnown RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 KRT5P13647 590 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 NR2F2P24468 414 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 ALDH1B1P30837 517 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 INPP5BP32019 993 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FNBP4Q8N3X1 1017 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 CHURC1Q8WUH1 139 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 PNPLA7Q6ZV29 1317 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FAM205CA6NFA0 338 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 BBOX1O75936 387 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FOSP01100 380 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 MYCLP12524 364 aaPredicted RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 CEP57Q86XR8 500 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 LARGE2Q8N3Y3 721 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 UBL4BQ8N7F7 174 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 FAM71BQ8TC56 605 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 TMEM47Q9BQJ4 181 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 NDST4Q9H3R1 872 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
VCAN-202ENST00000342785 LARSQ9P2J5 1176 aaKnown RBP7.93□□□□□ -1.14
VCAN-202ENST00000342785 POLR1AO95602 1720 aaPredicted RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 KIAA1210Q9ULL0 1709 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 H0YIN7 160 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 SERPINB2P05120 415 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 BCRP11274 1271 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 CABS1Q96KC9 395 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 SAMD15Q9P1V8 674 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 AMFRQ9UKV5 643 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 VWDEQ8N2E2 1590 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 EIF4A3P38919 411 aaKnown RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 TERF2Q15554 542 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 FAM178BQ8IXR5 827 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 THAP9Q9H5L6 903 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 KIDINS220Q9ULH0 1771 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 TRIM49BA6NDI0 452 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 GCFC2P16383 781 aaKnown RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 CDK8P49336 464 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 DLGAP5Q15398 846 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 EXOC3L4Q17RC7 722 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 WDR44Q5JSH3 913 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 CEP85LQ5SZL2 805 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 MCTP2Q6DN12 878 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 SLFN12Q8IYM2 578 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 KIFAP3Q92845 792 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 FUCA2Q9BTY2 467 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.92□□□□□ -1.14
VCAN-202ENST00000342785 NEBLO76041 1014 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 GUCY2DQ02846 1103 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 CCDC170Q8IYT3 715 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 MB21D1Q8N884 522 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 BCAS4Q8TDM0 211 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 HOMER2Q9NSB8 354 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 FBXO2Q9UK22 296 aaPredicted RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 FAN1Q9Y2M0 1017 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 VIMP08670 466 aaKnown RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 NT5C2P49902 561 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 GNGT1P63211 74 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 ZNF365Q70YC5 407 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 KIFC2Q96AC6 838 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 GPR101Q96P66 508 aaPredicted RBP7.92□□□□□ -1.14
VCAN-202ENST00000342785 EPC1Q9H2F5 836 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 ASIC3Q9UHC3 531 aa7.92□□□□□ -1.14
VCAN-202ENST00000342785 KRIT1O00522 736 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 TTLL1O95922 423 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 IRX2Q9BZI1 471 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 EXOC7Q9UPT5 735 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 RPS6KA4O75676 772 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 GTF2A1P52655 376 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 MSL1Q68DK7 614 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 KCTD1Q719H9 257 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 CCDC105Q8IYK2 499 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 FAM204AQ9H8W3 233 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 TNS3Q68CZ2 1445 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 ATP1A2P50993 1020 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 IQCGQ9H095 443 aaKnown RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 NHEJ1Q9H9Q4 299 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 CPDO75976 1380 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 AGLP35573 1532 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 LGALS16A8MUM7 142 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 hCG_1984214I3L0E3 225 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 PRCPP42785 496 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 GRAPQ13588 217 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 ZNF713Q8N859 430 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 GPATCH11Q8N954 259 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 GRAPLQ8TC17 118 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 FBF1Q8TES7 1133 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 WDR24Q96S15 920 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 JRKLQ9Y4A0 524 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 TSPOAP1O95153 1857 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 PP2D1A8MPX8 630 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms