RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 H7C1D1 291 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 GNAQP50148 359 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 KRT83P78385 493 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.17
LMX1A-202ENST00000342310 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 PCDHA6Q9UN73 950 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 PCDHA8Q9Y5H6 950 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 CYTH3O43739 400 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
LMX1A-202ENST00000342310 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
LMX1A-202ENST00000342310 NAA35Q5VZE5 725 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 NFRKBQ6P4R8 1299 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 FBXL16Q8N461 479 aa13.96□□□□□ -0.17
LMX1A-202ENST00000342310 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
LMX1A-202ENST00000342310 ODF2Q5BJF6 829 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 TACC1O75410 805 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 LONP1P36776 959 aaKnown RBP13.95□□□□□ -0.18
LMX1A-202ENST00000342310 STAT3P40763 770 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 GFPT1Q06210 699 aaPredicted RBP13.95□□□□□ -0.18
LMX1A-202ENST00000342310 P2RX5Q93086 422 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 RASSF4Q9H2L5 321 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 C5P01031 1676 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 ZNF512BQ96KM6 892 aaPredicted RBP13.95□□□□□ -0.18
LMX1A-202ENST00000342310 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
LMX1A-202ENST00000342310 TSPYL1Q9H0U9 437 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
LMX1A-202ENST00000342310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
LMX1A-202ENST00000342310 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
LMX1A-202ENST00000342310 TUBB4AP04350 444 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 TBX2Q13207 712 aaPredicted RBP13.94□□□□□ -0.18
LMX1A-202ENST00000342310 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
LMX1A-202ENST00000342310 FOXR1Q6PIV2 292 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 TSG101Q99816 390 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 FUT8Q9BYC5 575 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 CCDC151A5D8V7 595 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 EHHADHQ08426 723 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
LMX1A-202ENST00000342310 E2F4Q16254 413 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 MICALL1Q8N3F8 863 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 HYOU1Q9Y4L1 999 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 PCDHB13Q9Y5F0 798 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 E9PMD0 336 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 DNM2P50570 870 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 RCSD1Q6JBY9 416 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 DBNDD1Q9H9R9 158 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 ADAMTS1Q9UHI8 967 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
LMX1A-202ENST00000342310 RNF40O75150 1001 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 GDF11O95390 407 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 PRR16Q569H4 304 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 C12orf60Q5U649 245 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 NUDT12Q9BQG2 462 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
LMX1A-202ENST00000342310 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 CLIC2O15247 247 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 RAB34Q9BZG1 259 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
LMX1A-202ENST00000342310 HOXA13P31271 388 aaPredicted RBP13.93□□□□□ -0.18
LMX1A-202ENST00000342310 ADCY7P51828 1080 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 USP40Q9NVE5 1235 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 PCDHA12Q9UN75 941 aa13.93□□□□□ -0.18
LMX1A-202ENST00000342310 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 TMEM110-MUSTN1A8MSY1 372 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 FUT2Q10981 343 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 UHMK1Q8TAS1 419 aaKnown RBP13.92□□□□□ -0.18
LMX1A-202ENST00000342310 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 LSM14BQ9BX40 385 aaKnown RBP13.92□□□□□ -0.18
LMX1A-202ENST00000342310 LRRC53A6NM62 1247 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 LRRIQ3A6PVS8 624 aaPredicted RBP13.92□□□□□ -0.18
LMX1A-202ENST00000342310 LGALS16A8MUM7 142 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 ABCB4P21439 1286 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 FAM133AQ8N9E0 248 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
LMX1A-202ENST00000342310 DDX12PQ92771 950 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 BCL9O00512 1426 aa13.92□□□□□ -0.18
LMX1A-202ENST00000342310 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
LMX1A-202ENST00000342310 AKR1B1P15121 316 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms