RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 CCDC42Q96M95 316 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 THAP9Q9H5L6 903 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 ZFATQ9P243 1243 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 RPS6KL1Q9Y6S9 549 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 GOLGA8AA7E2F4 631 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
SMPD1-201ENST00000342245 LINGO3P0C6S8 592 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 ODF2Q5BJF6 829 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 FIGNQ5HY92 759 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 CHMP6Q96FZ7 201 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 TSC22D3Q99576 134 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 TTYH3Q9C0H2 523 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
SMPD1-201ENST00000342245 PCDHB6Q9Y5E3 794 aa20.46■□□□□ 0.87
SMPD1-201ENST00000342245 ASAP2O43150 1006 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 CLTAP09496 248 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 SRGNP10124 158 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 PDIA5Q14554 519 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 NFRKBQ6P4R8 1299 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 PAPOLBQ9NRJ5 636 aaKnown RBP20.45■□□□□ 0.86
SMPD1-201ENST00000342245 LRWD1Q9UFC0 647 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 DUSP10Q9Y6W6 482 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 CUL1Q13616 776 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 SGMS1Q86VZ5 419 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 SLC26A6Q9BXS9 759 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 IFIH1Q9BYX4 1025 aaKnown RBP20.45■□□□□ 0.86
SMPD1-201ENST00000342245 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
SMPD1-201ENST00000342245 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-201ENST00000342245 GTPBP6O43824 516 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 RANBP6O60518 1105 aaKnown RBP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 ATP2C2O75185 946 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 IFNAR1P17181 557 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 TRIM21P19474 475 aaKnown RBP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 KIF5BP33176 963 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 GUCY2FP51841 1108 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 RBM5P52756 815 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 USP49Q70CQ1 688 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 RNF10Q8N5U6 811 aaKnown RBP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 POLD4Q9HCU8 107 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 PCDHA13Q9Y5I0 950 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 CAPN6Q9Y6Q1 641 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 LCA5LO95447 670 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 PNMA8AQ86V59 439 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-201ENST00000342245 AGAP11Q8TF27 550 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 RGL1Q9NZL6 768 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 NID2Q14112 1375 aa20.44■□□□□ 0.86
SMPD1-201ENST00000342245 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 SMCR8Q8TEV9 937 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-201ENST00000342245 CASKIN2Q8WXE0 1202 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 NEUROD6Q96NK8 337 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-201ENST00000342245 EXOC1Q9NV70 894 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 CHCHD3Q9NX63 227 aaKnown RBP20.43■□□□□ 0.86
SMPD1-201ENST00000342245 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMPD1-201ENST00000342245 DIAPH2O60879 1101 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 MTHFD1LQ6UB35 978 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 ISCUQ9H1K1 167 aa20.43■□□□□ 0.86
SMPD1-201ENST00000342245 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 A0A087X0B3 334 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 H0YGN5 161 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 FOXP2O15409 715 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 PJA2O43164 708 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 ATP4AP20648 1035 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 HNRNPH3P31942 346 aaKnown RBP20.42■□□□□ 0.86
SMPD1-201ENST00000342245 TNNC1P63316 161 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 LAMB3Q13751 1172 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 CCDC57Q2TAC2 916 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 SYMPKQ92797 1274 aaKnown RBP20.42■□□□□ 0.86
SMPD1-201ENST00000342245 NFS1Q9Y697 457 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 RASSF10A6NK89 507 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 B4DLN1 442 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 MOCS3O95396 460 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 GALNT15Q8N3T1 639 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 KCNMB3Q9NPA1 279 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 ANKIB1Q9P2G1 1089 aa20.42■□□□□ 0.86
SMPD1-201ENST00000342245 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 MARF1Q9Y4F3 1742 aaKnown RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 A0A0G2JS52 829 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 HSD17B3P37058 310 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 MRPS25P82663 173 aaKnown RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 SDCCAG8Q86SQ7 713 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 APPBP2Q92624 585 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 EZH1Q92800 747 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 L3MBTL1Q9Y468 752 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 SETD1BQ9UPS6 1966 aaKnown RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 NQO1P15559 274 aaKnown RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 CTNNA1P35221 906 aaKnown RBP20.41■□□□□ 0.86
SMPD1-201ENST00000342245 LIFRP42702 1097 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 CYP27A1Q02318 531 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 ZNF844Q08AG5 666 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
SMPD1-201ENST00000342245 IRF2BP1Q8IU81 584 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms