RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 FAM13AO94988 1023 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 KRT15P19012 456 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 RBBP5Q15291 538 aaKnown RBP13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 TMC4Q7Z404 712 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 MLXIPLQ9NP71 852 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
SSX2IP-201ENST00000342203 SMCO2A6NFE2 343 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 ELF1P32519 619 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 BIRC2Q13490 618 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 SPDL1Q96EA4 605 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 HAUS2Q9NVX0 235 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 USP6P35125 1406 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 LDHCP07864 332 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 GYG1P46976 350 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 OTUD6AQ7L8S5 288 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 PALMO75781 387 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 PHKG2P15735 406 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 CCNE1P24864 410 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 LIFRP42702 1097 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 GFPT1Q06210 699 aaPredicted RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 PTPN22Q9Y2R2 807 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 MCAMP43121 646 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 HVCN1Q96D96 273 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 SMC6Q96SB8 1091 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 PDE8AO60658 829 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 MYO5CQ9NQX4 1742 aa13.75□□□□□ -0.21
SSX2IP-201ENST00000342203 UNC13BO14795 1591 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 PDE8BO95263 885 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 TAF11Q15544 211 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 PARP9Q8IXQ6 854 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.219e-7■■□□□ 13.7
SSX2IP-201ENST00000342203 ARL8AQ96BM9 186 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 VIPAS39Q9H9C1 493 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 SEMA3EO15041 775 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 WHAMMQ8TF30 809 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 DUSP10Q9Y6W6 482 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 LSP1P33241 339 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 REXO1Q8N1G1 1221 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 H0Y3Z8 333 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 KCNB2Q92953 911 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 ACSBG1Q96GR2 724 aa13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 GEMIN8Q9NWZ8 242 aaKnown RBP13.74□□□□□ -0.21
SSX2IP-201ENST00000342203 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 ENO4A6NNW6 628 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 PGRMC1O00264 195 aaKnown RBP13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 SUN1O94901 812 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 PLCG1P19174 1290 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 TMOD1P28289 359 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 ERVK-24P63145 666 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 UBL4BQ8N7F7 174 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 VCXQ9H320 206 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 STAT1P42224 750 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 MAN2A1Q16706 1144 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 SYCE1Q8N0S2 351 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 CUL5Q93034 780 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 DAAM1Q9Y4D1 1078 aa13.73□□□□□ -0.21
SSX2IP-201ENST00000342203 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms