RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MASTLQ96GX5 879 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 DUSP9Q99956 384 aaKnown RBP22.55■■□□□ 1.2
SPG7-202ENST00000341316 C7orf25Q9BPX7 421 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 MYO3BQ8WXR4 1341 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 FAM196BA6NMK8 535 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 CRKP46108 304 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 PLA2G4AP47712 749 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 ERVK-24P63145 666 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 UBXN1Q04323 297 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 CALCRLQ16602 461 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 KCTD1Q719H9 257 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 EEF2KMTQ96G04 330 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 ABHD10Q9NUJ1 306 aa22.55■■□□□ 1.2
SPG7-202ENST00000341316 PNMA6FA0A0J9YX94 578 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 FCER1AP12319 257 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 PDE4DQ08499 809 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 GRB10Q13322 594 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 ANKRD20A12PQ8NF67 263 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 HPS3Q969F9 1004 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 EPC1Q9H2F5 836 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 LZTFL1Q9NQ48 299 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 MYH8P13535 1937 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 USP17L10C9JJH3 530 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 PSMA7O14818 248 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 ASIC1P78348 528 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 KIAA0825Q8IV33 1275 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 ZNF622Q969S3 477 aaKnown RBP eCLIP22.54■■□□□ 1.29e-7■■■□□ 14.9
SPG7-202ENST00000341316 CCDC51Q96ER9 411 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
SPG7-202ENST00000341316 SEC31AO94979 1220 aaKnown RBP22.53■■□□□ 1.2
SPG7-202ENST00000341316 TCP10Q12799 353 aa22.53■■□□□ 1.2
SPG7-202ENST00000341316 ORC2Q13416 577 aaPredicted RBP22.53■■□□□ 1.2
SPG7-202ENST00000341316 PNMA5Q96PV4 448 aa22.53■■□□□ 1.2
SPG7-202ENST00000341316 NUP88Q99567 741 aaPredicted RBP22.53■■□□□ 1.2
SPG7-202ENST00000341316 RIC8AQ9NPQ8 531 aa22.53■■□□□ 1.2
SPG7-202ENST00000341316 BLOC1S4Q9NUP1 217 aa22.53■■□□□ 1.2
SPG7-202ENST00000341316 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 TNNI2P48788 182 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 MAP3K9P80192 1104 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 STIM1Q13586 685 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 CCDC96Q2M329 555 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 ZNF507Q8TCN5 953 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 ZDHHC15Q96MV8 337 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 NUDT12Q9BQG2 462 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 THAP9Q9H5L6 903 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 LRWD1Q9UFC0 647 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 POTEMA6NI47 508 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 APBA3O96018 575 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 CLK2P49760 499 aaKnown RBP22.52■■□□□ 1.2
SPG7-202ENST00000341316 FXR2P51116 673 aaKnown RBP eCLIP22.52■■□□□ 1.2
SPG7-202ENST00000341316 SEMA3FQ13275 785 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 ANKRD40Q6AI12 368 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 MB21D1Q8N884 522 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 DHTKD1Q96HY7 919 aaPredicted RBP22.52■■□□□ 1.2
SPG7-202ENST00000341316 EXOC1Q9NV70 894 aa22.52■■□□□ 1.2
SPG7-202ENST00000341316 C10orf71Q711Q0 1435 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 LGALS16A8MUM7 142 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 PLSCR1O15162 318 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 TPM1P09493 284 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 ACRBPQ8NEB7 543 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 MRFAP1Q9Y605 127 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 GREB1LQ9C091 1923 aaPredicted RBP22.51■■□□□ 1.19
SPG7-202ENST00000341316 DDTLA6NHG4 134 aaPredicted RBP22.51■■□□□ 1.19
SPG7-202ENST00000341316 ABL1P00519 1130 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 EEF1GP26641 437 aaKnown RBP22.51■■□□□ 1.19
SPG7-202ENST00000341316 KRT9P35527 623 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 PPP2R3AQ06190 1150 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 PODNQ7Z5L7 613 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 P2RX5Q93086 422 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 GJA10Q969M2 543 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 CALML4Q96GE6 196 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 EHD4Q9H223 541 aa22.51■■□□□ 1.19
SPG7-202ENST00000341316 MYMKA6NI61 221 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 MCM6Q14566 821 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 CSGALNACT2Q8N6G5 542 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 KIAA0895Q8NCT3 520 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 MTMR8Q96EF0 704 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 ZBTB5O15062 677 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 NKRFO15226 690 aaKnown RBP eCLIP22.5■■□□□ 1.19
SPG7-202ENST00000341316 CCNE1P24864 410 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 GPATCH4Q5T3I0 446 aaKnown RBP22.5■■□□□ 1.19
SPG7-202ENST00000341316 PPP1R18Q6NYC8 613 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
SPG7-202ENST00000341316 ZNF219Q9P2Y4 722 aaPredicted RBP22.5■■□□□ 1.19
SPG7-202ENST00000341316 FAM198AQ9UFP1 575 aa22.5■■□□□ 1.19
SPG7-202ENST00000341316 TTC26A0AVF1 554 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 ERICH4A6NGS2 130 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 TRIM14Q14142 442 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 TEX35Q5T0J7 233 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 TAF3Q5VWG9 929 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 TMTC1Q8IUR5 882 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 SIPA1L1O43166 1804 aa22.49■■□□□ 1.19
SPG7-202ENST00000341316 B4DLN1 442 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 PES1O00541 588 aaKnown RBP22.48■■□□□ 1.19
SPG7-202ENST00000341316 DACT2Q5SW24 774 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 KCNK18Q7Z418 384 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 C2CD5Q86YS7 1000 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 CHP1Q99653 195 aa22.48■■□□□ 1.19
SPG7-202ENST00000341316 EEF2P13639 858 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms