RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
TDP2-201ENST00000341060 PLSCR1O15162 318 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 TECP42680 631 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 AMPD3Q01432 767 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 STK4Q13043 487 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 MEA1Q16626 185 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 WHAMMP3Q1A5X7 153 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 RETREG2Q8NC44 543 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 TBC1D22AQ8WUA7 517 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
TDP2-201ENST00000341060 FUT8Q9BYC5 575 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 B4DLN1 442 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 ASIC1P78348 528 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 AMPD2Q01433 879 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
TDP2-201ENST00000341060 HAUS4Q9H6D7 363 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 GREB1LQ9C091 1923 aaPredicted RBP16.29■□□□□ 0.2
TDP2-201ENST00000341060 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
TDP2-201ENST00000341060 USP17L5A8MUK1 530 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 PDHBP11177 359 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 ST5P78524 1137 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 TSR1Q2NL82 804 aaKnown RBP16.28■□□□□ 0.2
TDP2-201ENST00000341060 ANKRD40Q6AI12 368 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
TDP2-201ENST00000341060 NUP58Q9BVL2 599 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
TDP2-201ENST00000341060 FCER1AP12319 257 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 LONRF2Q1L5Z9 754 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 ZNF662Q6ZS27 426 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 CNOT6LQ96LI5 555 aaKnown RBP16.28■□□□□ 0.2
TDP2-201ENST00000341060 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 VAT1LQ9HCJ6 419 aa16.28■□□□□ 0.2
TDP2-201ENST00000341060 PSMD14O00487 310 aa16.27■□□□□ 0.2
TDP2-201ENST00000341060 TRIM21P19474 475 aaKnown RBP16.27■□□□□ 0.2
TDP2-201ENST00000341060 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
TDP2-201ENST00000341060 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
TDP2-201ENST00000341060 GUCA1BQ9UMX6 200 aa16.27■□□□□ 0.2
TDP2-201ENST00000341060 C10orf71Q711Q0 1435 aa16.27■□□□□ 0.2
TDP2-201ENST00000341060 CTAGE15A4D2H0 777 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 BBOX1O75936 387 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 CTAGE8P0CG41 777 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.19
TDP2-201ENST00000341060 HERVK_113P62684 666 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 MIIPQ5JXC2 388 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 CTAGE6Q86UF2 777 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 CTAGE4Q8IX94 777 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 KIAA0895Q8NCT3 520 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 AGPAT5Q9NUQ2 364 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 MTMR4Q9NYA4 1195 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 STK17AQ9UEE5 414 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 MYO6Q9UM54 1294 aa16.27■□□□□ 0.19
TDP2-201ENST00000341060 GOLGB1Q14789 3259 aaKnown RBP16.26■□□□□ 0.19
TDP2-201ENST00000341060 MAP2K7O14733 419 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
TDP2-201ENST00000341060 SNHG28P0DPA3 235 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 GYS1P13807 737 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 KRT83P78385 493 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 ERGIC2Q96RQ1 377 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 PNKPQ96T60 521 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 TRIM10Q9UDY6 481 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
TDP2-201ENST00000341060 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 SERPINB2P05120 415 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 TXKP42681 527 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 ZBED6P86452 979 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 GABPAQ06546 454 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 GRB10Q13322 594 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 CALCRLQ16602 461 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 TRAPPC11Q7Z392 1133 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 CYLC1P35663 651 aaPredicted RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 ADCY7P51828 1080 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 BEND6Q5SZJ8 279 aaPredicted RBP16.25■□□□□ 0.19
TDP2-201ENST00000341060 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 CENPPQ6IPU0 288 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
TDP2-201ENST00000341060 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms