RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 SEC31BQ9NQW1 1179 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 H0YCG3 227 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
TNC-201ENST00000341037 ECE1P42892 770 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 ZBTB33Q86T24 672 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 CNOT6LQ96LI5 555 aaKnown RBP12.45□□□□□ -0.42
TNC-201ENST00000341037 TM6SF1Q9BZW5 370 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 FAM114A2Q9NRY5 505 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 BZW2Q9Y6E2 419 aaKnown RBP12.45□□□□□ -0.42
TNC-201ENST00000341037 UBN2Q6ZU65 1347 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
TNC-201ENST00000341037 SNAP25P60880 206 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 RASSF7Q02833 373 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 TSNAXIP1Q2TAA8 658 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 MIS18BP1Q6P0N0 1132 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 MEIS1O00470 390 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 PDZD4Q76G19 769 aaPredicted RBP12.45□□□□□ -0.42
TNC-201ENST00000341037 SSH3Q8TE77 659 aa12.45□□□□□ -0.42
TNC-201ENST00000341037 PTPRTO14522 1441 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 PRPSAP1Q14558 356 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 SGK1O00141 431 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 BRD1O95696 1058 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 CCND2P30279 289 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 CLNS1AP54105 237 aaKnown RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 PPFIA1Q13136 1202 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 LRRC41Q15345 812 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 LONP1P36776 959 aaKnown RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 BLMP54132 1417 aaPredicted RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 HNRNPDLO14979 420 aaKnown RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 CASP2P42575 452 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 NSFP46459 744 aaKnown RBP12.44□□□□□ -0.42
TNC-201ENST00000341037 WHAMMP3Q1A5X7 153 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 MYRIPQ8NFW9 859 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 TTLL1O95922 423 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 MESDQ14696 234 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
TNC-201ENST00000341037 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 NLRP7Q8WX94 980 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 CLIC2O15247 247 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 LTKP29376 864 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 MFAP3P55082 362 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 GNGT1P63211 74 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 RBBP5Q15291 538 aaKnown RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 TTC19Q6DKK2 380 aaPredicted RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 HDAC11Q96DB2 347 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 CCDC68Q9H2F9 335 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 RNF40O75150 1001 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 TACO1Q9BSH4 297 aaKnown RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 AP5M1Q9H0R1 490 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 CMA1P23946 247 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 SNX1Q13596 522 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 KMT5AQ9NQR1 393 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 SERPINB2P05120 415 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 RAPH1Q70E73 1250 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
TNC-201ENST00000341037 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 NUB1Q9Y5A7 615 aa12.43□□□□□ -0.42
TNC-201ENST00000341037 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
TNC-201ENST00000341037 S100BP04271 92 aaPredicted RBP12.42□□□□□ -0.42
TNC-201ENST00000341037 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 CHMP6Q96FZ7 201 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 PPME1Q9Y570 386 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 TSPOAP1O95153 1857 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 RAD17O75943 681 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 PDE8BO95263 885 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 COPB1P53618 953 aaKnown RBP12.42□□□□□ -0.42
TNC-201ENST00000341037 YWHAGP61981 247 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNC-201ENST00000341037 PKP1Q13835 747 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 FAM196AQ6ZSG2 479 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 GBP7Q8N8V2 638 aaPredicted RBP12.42□□□□□ -0.42
TNC-201ENST00000341037 PIGSQ96S52 555 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 ATP10DQ9P241 1426 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 BAG2O95816 211 aa12.42□□□□□ -0.42
TNC-201ENST00000341037 KRT3P12035 628 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms