RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PPP2R1AP30153 589 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 KIAA0319Q5VV43 1072 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 RPAINQ86UA6 219 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 RIPOR3Q96MK2 946 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 TRPV6Q9H1D0 765 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 BPTFQ12830 3046 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 SIP14410 1827 aa14.04□□□□□ -0.16
ATXN3-201ENST00000340660 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 LOC730098B7Z3J9 87 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L15C9J2P7 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L13C9JLJ4 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L11C9JVI0 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L18D6R9N7 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L22D6RA61 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L17D6RBQ6 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L19D6RCP7 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L20D6RJB6 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 B4GALT4O60513 344 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 ACTN1P12814 892 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 ERCC3P19447 782 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 ATXN1P54253 815 aaKnown RBP14.03□□□□□ -0.16
ATXN3-201ENST00000340660 USP17L24Q0WX57 530 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 SMAD4Q13485 552 aaKnown RBP14.03□□□□□ -0.16
ATXN3-201ENST00000340660 CBX2Q14781 532 aaPredicted RBP14.03□□□□□ -0.16
ATXN3-201ENST00000340660 TIGD5Q53EQ6 642 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 TAF7LQ5H9L4 462 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 CRACR2BQ8N4Y2 399 aaPredicted RBP14.03□□□□□ -0.16
ATXN3-201ENST00000340660 BANK1Q8NDB2 785 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 EHBP1Q8NDI1 1231 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 WDR66Q8TBY9 1149 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 TINF2Q9BSI4 451 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
ATXN3-201ENST00000340660 SCN5AQ14524 2016 aa14.02□□□□□ -0.16
ATXN3-201ENST00000340660 LMNAP02545 664 aaKnown RBP14.02□□□□□ -0.17
ATXN3-201ENST00000340660 C6orf222P0C671 652 aaPredicted RBP14.02□□□□□ -0.17
ATXN3-201ENST00000340660 USP17L2Q6R6M4 530 aa14.02□□□□□ -0.17
ATXN3-201ENST00000340660 LYPD8Q6UX82 237 aa14.02□□□□□ -0.17
ATXN3-201ENST00000340660 PCSK9Q8NBP7 692 aaKnown RBP14.02□□□□□ -0.17
ATXN3-201ENST00000340660 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.17
ATXN3-201ENST00000340660 LIMD1Q9UGP4 676 aa14.02□□□□□ -0.17
ATXN3-201ENST00000340660 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 ADCY6O43306 1168 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 ASNSP08243 561 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 LINC01559Q495D7 138 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 BAP1Q92560 729 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 C12orf42Q96LP6 360 aa14.01□□□□□ -0.17
ATXN3-201ENST00000340660 A0A1B0GUL7 405 aa14□□□□□ -0.17
ATXN3-201ENST00000340660 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
ATXN3-201ENST00000340660 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
ATXN3-201ENST00000340660 ABRAQ8N0Z2 381 aa14□□□□□ -0.17
ATXN3-201ENST00000340660 SHCBP1Q8NEM2 672 aa14□□□□□ -0.17
ATXN3-201ENST00000340660 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
ATXN3-201ENST00000340660 CTAGE5O15320 804 aa13.99□□□□□ -0.17
ATXN3-201ENST00000340660 DUSP11O75319 330 aaKnown RBP13.99□□□□□ -0.17
ATXN3-201ENST00000340660 LDHBP07195 334 aaKnown RBP13.99□□□□□ -0.17
ATXN3-201ENST00000340660 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
ATXN3-201ENST00000340660 DCLK2Q8N568 766 aa13.99□□□□□ -0.17
ATXN3-201ENST00000340660 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
ATXN3-201ENST00000340660 UPF3AQ9H1J1 476 aaKnown RBP13.99□□□□□ -0.17
ATXN3-201ENST00000340660 CTNNA3Q9UI47 895 aa13.99□□□□□ -0.17
ATXN3-201ENST00000340660 TBX10O75333 385 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 DMWDQ09019 674 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 QPCTQ16769 361 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 PTPROQ16827 1216 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 LURAP1LQ8IV03 231 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 ZNF511Q8NB15 262 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 NSUN3Q9H649 340 aaKnown RBP13.98□□□□□ -0.17
ATXN3-201ENST00000340660 ATP13A2Q9NQ11 1180 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
ATXN3-201ENST00000340660 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-201ENST00000340660 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-201ENST00000340660 GDF11O95390 407 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 F12P00748 615 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-201ENST00000340660 PGK2P07205 417 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 VCAM1P19320 739 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 TMPOP42166 694 aaKnown RBP13.97□□□□□ -0.17
ATXN3-201ENST00000340660 GJA9P57773 515 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 GNASQ5JWF2 1037 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 HINFPQ9BQA5 517 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 SMG1Q96Q15 3661 aaKnown RBP13.97□□□□□ -0.17
ATXN3-201ENST00000340660 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
ATXN3-201ENST00000340660 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 DCDC2BA2VCK2 349 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 ICAM3P32942 547 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 BTDP43251 543 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 RHBDL3P58872 404 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
ATXN3-201ENST00000340660 DEFB103AP81534 67 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 PTPN21Q16825 1174 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 CXCL17Q6UXB2 119 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
ATXN3-201ENST00000340660 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms