RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GSDMDP57764 484 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 PFKFB3Q16875 520 aaPredicted RBP16.99■□□□□ 0.31
BRAT1-201ENST00000340611 MNS1Q8NEH6 495 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 COA7Q96BR5 231 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.99■□□□□ 0.31
BRAT1-201ENST00000340611 MNAT1P51948 309 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 ISM2Q6H9L7 571 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 SGSM3Q96HU1 749 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 HERC5Q9UII4 1024 aaKnown RBP16.99■□□□□ 0.31
BRAT1-201ENST00000340611 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 USP17L10C9JJH3 530 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 F5H6K3 240 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 NLRP5P59047 1200 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 KLRC3Q07444 240 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 PHF20Q9BVI0 1012 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 VPS18Q9P253 973 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 SLC1A4P43007 532 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 TOB1P50616 345 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-201ENST00000340611 ZNF543Q08ER8 600 aa16.98■□□□□ 0.31
BRAT1-201ENST00000340611 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
BRAT1-201ENST00000340611 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 TNNI2P48788 182 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 NAT10Q9H0A0 1025 aaKnown RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 L2HGDHQ9H9P8 463 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 NDUFB10O96000 172 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 NDUFA8P51970 172 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 SAFBQ15424 915 aaKnown RBP eCLIP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 DNAI1Q9UI46 699 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 KIF2AO00139 706 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 CAP2P40123 477 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-201ENST00000340611 PCDHB6Q9Y5E3 794 aa16.97■□□□□ 0.31
BRAT1-201ENST00000340611 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
BRAT1-201ENST00000340611 ADM5C9JUS6 153 aa16.96■□□□□ 0.31
BRAT1-201ENST00000340611 JMJD4Q9H9V9 463 aa16.96■□□□□ 0.31
BRAT1-201ENST00000340611 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
BRAT1-201ENST00000340611 H3BQF6 201 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 PPP1R11O60927 126 aaPredicted RBP16.96■□□□□ 0.3
BRAT1-201ENST00000340611 SNHG28P0DPA3 235 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 SCP2P22307 547 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 STK38Q15208 465 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 RPAINQ86UA6 219 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 FMR1NBQ8N0W7 255 aaPredicted RBP16.96■□□□□ 0.3
BRAT1-201ENST00000340611 MRPS27Q92552 414 aaKnown RBP16.96■□□□□ 0.3
BRAT1-201ENST00000340611 CARD6Q9BX69 1037 aa16.96■□□□□ 0.3
BRAT1-201ENST00000340611 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-201ENST00000340611 GNAQP50148 359 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 TNFAIP1Q13829 316 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 LRCH2Q5VUJ6 765 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 PIK3AP1Q6ZUJ8 805 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 FAM177A1Q8N128 213 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-201ENST00000340611 MAP3K14Q99558 947 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 STXBP3O00186 592 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 URI1O94763 535 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-201ENST00000340611 KRT2P35908 639 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 GOLGA8FQ08AF8 430 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 GOLGA8DPQ0D2H9 430 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 ANO1Q5XXA6 986 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 MMS22LQ6ZRQ5 1243 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 BRAPQ7Z569 592 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 CLIC6Q96NY7 704 aa16.95■□□□□ 0.3
BRAT1-201ENST00000340611 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 TMEM232C9JQI7 657 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 IBSPP21815 317 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-201ENST00000340611 NAPAP54920 295 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 GSCP56915 257 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-201ENST00000340611 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
BRAT1-201ENST00000340611 PCNTO95613 3336 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 XBP1P17861 261 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 GRIN1Q05586 938 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 BIRC2Q13490 618 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 EXOC4Q96A65 974 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 SPZ1Q9BXG8 430 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 IMPACTQ9P2X3 320 aa16.94■□□□□ 0.3
BRAT1-201ENST00000340611 COL2A1P02458 1487 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-201ENST00000340611 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 FAM83BQ5T0W9 1011 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 CCDC150Q8NCX0 1101 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 MKL1Q969V6 931 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 ZNF341Q9BYN7 854 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 FBXO28Q9NVF7 368 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 KIAA1468Q9P260 1216 aa16.93■□□□□ 0.3
BRAT1-201ENST00000340611 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
BRAT1-201ENST00000340611 IVLP07476 585 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms