RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LRRC37A2A6NM11 1700 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 AKR1A1P14550 325 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 KRT32Q14532 448 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 USH1GQ495M9 461 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 ARMCX2Q7L311 632 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 DHX32Q7L7V1 743 aaKnown RBP17.91■□□□□ 0.46
VAPA-201ENST00000340541 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 TMTC2Q8N394 836 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.91■□□□□ 0.46
VAPA-201ENST00000340541 SNX14Q9Y5W7 946 aa17.91■□□□□ 0.46
VAPA-201ENST00000340541 EPB41L2O43491 1005 aaKnown RBP17.9■□□□□ 0.46
VAPA-201ENST00000340541 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
VAPA-201ENST00000340541 Q7L0L9 218 aa17.9■□□□□ 0.46
VAPA-201ENST00000340541 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
VAPA-201ENST00000340541 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
VAPA-201ENST00000340541 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
VAPA-201ENST00000340541 ABCB11O95342 1321 aa17.9■□□□□ 0.46
VAPA-201ENST00000340541 ZBTB5O15062 677 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
VAPA-201ENST00000340541 TRIM60Q495X7 471 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 NFXL1Q6ZNB6 911 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 RNF207Q6ZRF8 634 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 FBXO11Q86XK2 927 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 RGS22Q8NE09 1264 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 MORC4Q8TE76 937 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 TBC1D5Q92609 795 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 PIGSQ96S52 555 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
VAPA-201ENST00000340541 PTPDC1A2A3K4 754 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 DLL1O00548 723 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 OPLAHO14841 1288 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 CPA1P15085 419 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 RXRAP19793 462 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
VAPA-201ENST00000340541 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
VAPA-201ENST00000340541 FERMT2Q96AC1 680 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
VAPA-201ENST00000340541 AMNQ9BXJ7 453 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 BRPF3Q9ULD4 1205 aa17.88■□□□□ 0.45
VAPA-201ENST00000340541 LTBP2Q14767 1821 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 ASB14A6NK59 587 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 ADCY6O43306 1168 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 PGK1P00558 417 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 HMGB1P09429 215 aaKnown RBP17.87■□□□□ 0.45
VAPA-201ENST00000340541 CALML3P27482 149 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 TLE2Q04725 743 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 RAB11FIP4Q86YS3 637 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 BADQ92934 168 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 JAKMIP1Q96N16 626 aaKnown RBP17.87■□□□□ 0.45
VAPA-201ENST00000340541 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 SPZ1Q9BXG8 430 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 MAF1Q9H063 256 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 PRDM5Q9NQX1 630 aaPredicted RBP17.87■□□□□ 0.45
VAPA-201ENST00000340541 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
VAPA-201ENST00000340541 SLC12A7Q9Y666 1083 aa17.87■□□□□ 0.45
VAPA-201ENST00000340541 TRIM43BA6NCK2 446 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 MOXD2PA6NHM9 499 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 ADAMTS4O75173 837 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 DUSP11O75319 330 aaKnown RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 PLEKHA8P1O95397 391 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 CALM1P0DP23 149 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 CALM2P0DP24 149 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 CALM3P0DP25 149 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 SMARCA1P28370 1054 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 KIF5BP33176 963 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 ALDH5A1P51649 535 aaPredicted RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 GHRHRQ02643 423 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 SHHQ15465 462 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 APOA5Q6Q788 366 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 SRBD1Q8N5C6 995 aaKnown RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 KLHDC9Q8NEP7 349 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 TRIM43Q96BQ3 446 aaPredicted RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 COL20A1Q9P218 1284 aa17.86■□□□□ 0.45
VAPA-201ENST00000340541 ADD3Q9UEY8 706 aaKnown RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
VAPA-201ENST00000340541 LOC102724159A0A0B4J2E5 919 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 A0A0C4DFX4 3053 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 A0A1W2PQ45 241 aaPredicted RBP17.85■□□□□ 0.45
VAPA-201ENST00000340541 A0A1W2PQY0 241 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 KIAA0355O15063 1070 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 CLTBP09497 229 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 EDNRBP24530 442 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
VAPA-201ENST00000340541 PWP2Q15269 919 aaKnown RBP17.85■□□□□ 0.45
VAPA-201ENST00000340541 CCDC144BQ3MJ40 725 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 CMTR1Q8N1G2 835 aaKnown RBP17.85■□□□□ 0.45
VAPA-201ENST00000340541 FANCBQ8NB91 859 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 SYTL5Q8TDW5 730 aaPredicted RBP17.85■□□□□ 0.45
VAPA-201ENST00000340541 LZTS2Q9BRK4 669 aa17.85■□□□□ 0.45
VAPA-201ENST00000340541 PCDHA1Q9Y5I3 950 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms