RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 FOXP1Q9H334 677 aaPredicted RBP16.89■□□□□ 0.3
CSRP1-201ENST00000340006 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.3
CSRP1-201ENST00000340006 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 COPB2P35606 906 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 MROH8Q9H579 483 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 TMEM260Q9NX78 707 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
CSRP1-201ENST00000340006 CCDC194A0A1B0GVG4 234 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 MEIS2O14770 477 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 OPLAHO14841 1288 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 F13A1P00488 732 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 NPY5RQ15761 445 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 NOSTRINQ8IVI9 506 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 DAGLBQ8NCG7 672 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 EFCC1Q9HA90 598 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 KIF28PB7ZC32 967 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 U2AF2P26368 475 aaKnown RBP eCLIP16.88■□□□□ 0.29
CSRP1-201ENST00000340006 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
CSRP1-201ENST00000340006 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 PIK3AP1Q6ZUJ8 805 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 PORCNQ9H237 461 aa16.88■□□□□ 0.29
CSRP1-201ENST00000340006 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
CSRP1-201ENST00000340006 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 CEP350Q5VT06 3117 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 FCER1AP12319 257 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
CSRP1-201ENST00000340006 KCTD2Q14681 263 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 SAMD3Q8N6K7 520 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 ATP6V1DQ9Y5K8 247 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 IVNS1ABPQ9Y6Y0 642 aa16.87■□□□□ 0.29
CSRP1-201ENST00000340006 ZNFX1Q9P2E3 1918 aaKnown RBP16.86■□□□□ 0.29
CSRP1-201ENST00000340006 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 BCRP11274 1271 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 MCTP2Q6DN12 878 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 BRAPQ7Z569 592 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 SHCBP1Q8NEM2 672 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 PGBD1Q96JS3 809 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 MMP19Q99542 508 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 FOSP01100 380 aaPredicted RBP16.86■□□□□ 0.29
CSRP1-201ENST00000340006 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 GBP4Q96PP9 640 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 A1CFQ9NQ94 594 aaKnown RBP16.86■□□□□ 0.29
CSRP1-201ENST00000340006 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
CSRP1-201ENST00000340006 M0R2N6 131 aa16.85■□□□□ 0.29
CSRP1-201ENST00000340006 MAPK4P31152 587 aa16.85■□□□□ 0.29
CSRP1-201ENST00000340006 CLK2P49760 499 aaKnown RBP16.85■□□□□ 0.29
CSRP1-201ENST00000340006 HSD17B4P51659 736 aa16.85■□□□□ 0.29
CSRP1-201ENST00000340006 MAP2K1Q02750 393 aaPredicted RBP16.85■□□□□ 0.29
CSRP1-201ENST00000340006 RESTQ13127 1097 aa16.85■□□□□ 0.29
CSRP1-201ENST00000340006 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
CSRP1-201ENST00000340006 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
CSRP1-201ENST00000340006 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
CSRP1-201ENST00000340006 STRNO43815 780 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 AP3B2Q13367 1082 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 EARS2Q5JPH6 523 aaKnown RBP16.84■□□□□ 0.29
CSRP1-201ENST00000340006 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 CLEC17AQ6ZS10 378 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 TEX2Q8IWB9 1127 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 EHMT1Q9H9B1 1298 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 PFASO15067 1338 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 INF2Q27J81 1249 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 PLEKHH3Q7Z736 793 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 SYTL5Q8TDW5 730 aaPredicted RBP16.84■□□□□ 0.29
CSRP1-201ENST00000340006 TBCKQ8TEA7 893 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 TNFRSF25Q93038 417 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
CSRP1-201ENST00000340006 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
CSRP1-201ENST00000340006 FAM205CA6NFA0 338 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 POTEB2H3BUK9 544 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 BAG4O95429 457 aaKnown RBP16.83■□□□□ 0.28
CSRP1-201ENST00000340006 NBR1Q14596 966 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 ARHGEF16Q5VV41 709 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 GPR142Q7Z601 462 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 PURBQ96QR8 312 aaKnown RBP16.83■□□□□ 0.28
CSRP1-201ENST00000340006 RMDN3Q96TC7 470 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 ANO3Q9BYT9 981 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 MAF1Q9H063 256 aa16.83■□□□□ 0.28
CSRP1-201ENST00000340006 PGK2P07205 417 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
CSRP1-201ENST00000340006 UBXN2AP68543 259 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 SP3Q02447 781 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
CSRP1-201ENST00000340006 KIF22Q14807 665 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 TFIP11Q9UBB9 837 aaKnown RBP16.82■□□□□ 0.28
CSRP1-201ENST00000340006 MCM4P33991 863 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 CNTN2Q02246 1040 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
CSRP1-201ENST00000340006 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms