RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
NECAP1-201ENST00000339754 CCT6BQ92526 530 aa10.43□□□□□ -0.74
NECAP1-201ENST00000339754 MS4A14Q96JA4 679 aa10.43□□□□□ -0.74
NECAP1-201ENST00000339754 NUP58Q9BVL2 599 aa10.43□□□□□ -0.74
NECAP1-201ENST00000339754 LRP6O75581 1613 aa10.43□□□□□ -0.74
NECAP1-201ENST00000339754 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
NECAP1-201ENST00000339754 PPIP5K2O43314 1243 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 HEXIM1O94992 359 aaKnown RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 ATP6V1G2O95670 118 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 TRIM21P19474 475 aaKnown RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 HPDP32754 393 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 SARNPP82979 210 aaKnown RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 SPA17Q15506 151 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 TRADDQ15628 312 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 ZNF174Q15697 407 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 NBPF20Q3BBV1 942 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 CASKIN2Q8WXE0 1202 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 HOOK2Q96ED9 719 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 CCDC42Q96M95 316 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 THAP9Q9H5L6 903 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 EBF2Q9HAK2 575 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 NOD2Q9HC29 1040 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 SALL4Q9UJQ4 1053 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 PLAAQ9Y263 795 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 EME2A4GXA9 379 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 H0YGN5 161 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 TCIRG1Q13488 830 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 ARFGAP2Q8N6H7 521 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 TATDN2Q93075 761 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 IFIH1Q9BYX4 1025 aaKnown RBP10.42□□□□□ -0.74
NECAP1-201ENST00000339754 SLC52A2Q9HAB3 445 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 EXOC1Q9NV70 894 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 RMND1Q9NWS8 449 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 NFS1Q9Y697 457 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
NECAP1-201ENST00000339754 LCA5LO95447 670 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 GHRP10912 638 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 TMOD1P28289 359 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 HNRNPH3P31942 346 aaKnown RBP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 IL17AQ16552 155 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 CDCA2Q69YH5 1023 aaPredicted RBP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 PLCB1Q9NQ66 1216 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 BATF3Q9NR55 127 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 ARHGAP20Q9P2F6 1191 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 ABCC12Q96J65 1359 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 BMP15O95972 392 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 SNRPA1P09661 255 aaKnown RBP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 PPARDQ03181 441 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 PTGDRQ13258 359 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 ALX1Q15699 326 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 KLHDC7AQ5VTJ3 777 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 FANCBQ8NB91 859 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 RAPGEF5Q92565 580 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 P3H4Q92791 437 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 CUL5Q93034 780 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 HVCN1Q96D96 273 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 RSRC1Q96IZ7 334 aaKnown RBP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 PHF20Q9BVI0 1012 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.41□□□□□ -0.74
NECAP1-201ENST00000339754 RIPOR2Q9Y4F9 1068 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 ATRNO75882 1429 aa10.41□□□□□ -0.74
NECAP1-201ENST00000339754 A0A1W2PQJ5 194 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-201ENST00000339754 MCAMP43121 646 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 ATP2C1P98194 919 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-201ENST00000339754 PKN1Q16512 942 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 FIGNQ5HY92 759 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 TTI2Q6NXR4 508 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 MAATS1Q7Z4T9 603 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CACNA2D3Q8IZS8 1091 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 NSMCE1Q8WV22 266 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 LMBR1Q8WVP7 490 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 STAMBPL1Q96FJ0 436 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
NECAP1-201ENST00000339754 ZKSCAN3Q9BRR0 538 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 KIF9Q9HAQ2 790 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CNOT8Q9UFF9 292 aaKnown RBP10.4□□□□□ -0.74
NECAP1-201ENST00000339754 PLAGL2Q9UPG8 496 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CAMTA1Q9Y6Y1 1673 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 BACH1O14867 736 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 ATP2C2O75185 946 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 PAEPP09466 180 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 ICA1Q05084 483 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 TNFRSF25Q93038 417 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 TBC1D31Q96DN5 1066 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 SPDL1Q96EA4 605 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 ALS2CR12Q96Q35 445 aa10.4□□□□□ -0.74
NECAP1-201ENST00000339754 DUSP9Q99956 384 aaKnown RBP10.4□□□□□ -0.74
NECAP1-201ENST00000339754 CWC25Q9NXE8 425 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms