RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF697Q5TEC3 545 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CES5AQ6NT32 575 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 NUP85Q9BW27 656 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ZBTB3Q9H5J0 574 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 RUBCNLQ9H714 662 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SPINK5Q9NQ38 1064 aaPredicted RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 DENND2AQ9ULE3 1009 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 MROH7Q68CQ1 1323 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 TTC41PQ6P2S7 1318 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CCDC169A6NNP5 214 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 NCAM2O15394 837 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 HIP1RO75146 1068 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 KRT8P05787 483 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 FER1L6Q2WGJ9 1857 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 RSPH1Q8WYR4 309 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 PSMD1Q99460 953 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CARD10Q9BWT7 1032 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ECT2Q9H8V3 914 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 MYO16Q9Y6X6 1858 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CSPG5O95196 566 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CETPP11597 493 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 NEK4P51957 841 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 AKNAD1Q5T1N1 836 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 KRT39Q6A163 491 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 GRK7Q8WTQ7 553 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 BACH2Q9BYV9 841 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CNOT10Q9H9A5 744 aaKnown RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 RANBP6O60518 1105 aaKnown RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CCDC184Q52MB2 194 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 AP1ARQ63HQ0 302 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 GALNT17Q6IS24 598 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SMC5Q8IY18 1101 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SIKE1Q9BRV8 207 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ADARB2Q9NS39 739 aaKnown RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 POLIQ9UNA4 740 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ECM29Q5VYK3 1845 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ATRNO75882 1429 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ERVV-2B6SEH9 535 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 H0Y3Z8 333 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 C21orf2O43822 256 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 RNF40O75150 1001 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SERPINB10P48595 397 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 TTC17Q96AE7 1141 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 EVI5LQ96CN4 794 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SEL1LQ9UBV2 794 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SLC4A7Q9Y6M7 1214 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 ATRXP46100 2492 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 METP08581 1390 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 MSCO60682 206 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 PYGLP06737 847 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 UBA7P41226 1012 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 BASP1P80723 227 aaKnown RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 PRKCQQ04759 706 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 GRIN1Q05586 938 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 CYTH1Q15438 398 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 FAM9CQ8IZT9 166 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 BRIP1Q9BX63 1249 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 FOXP3Q9BZS1 431 aa3.6□□□□□ -1.83
CSMD3-202ENST00000339701 XAB2Q9HCS7 855 aaKnown RBP3.6□□□□□ -1.83
CSMD3-202ENST00000339701 SMAPO00193 183 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 TTI1O43156 1089 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 DAPK3O43293 454 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 N4BP1O75113 896 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 VAMP4O75379 141 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 GTF2A1P52655 376 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 CAPRIN1Q14444 709 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 NSMCE1Q8WV22 266 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 SRPRBQ9Y5M8 271 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 SCINQ9Y6U3 715 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 SURF6O75683 361 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 SDHBP21912 280 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 TWISTNBQ3B726 338 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 NECAB2Q7Z6G3 386 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 EFCAB13Q8IY85 973 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 FAM76AQ8TAV0 307 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 RBM46Q8TBY0 533 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 JARID2Q92833 1246 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 SIL1Q9H173 461 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 DNAJC17Q9NVM6 304 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 ARHGAP26Q9UNA1 814 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 A0A1W2PRG0 241 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 TMEM232C9JQI7 657 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 hCG_1984214I3L0E3 225 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 ZBTB22O15209 634 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 ARHGAP6O43182 974 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 XPOTO43592 962 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 PEX19P40855 299 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 MED21Q13503 144 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 MCMDC2Q4G0Z9 681 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 HERC4Q5GLZ8 1057 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 HAUS3Q68CZ6 603 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 EFHBQ8N7U6 833 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 ACRBPQ8NEB7 543 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 LRRC37BQ96QE4 947 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 MORC2Q9Y6X9 1032 aaPredicted RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 USP17L8P0C7I0 530 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 KRT5P13647 590 aa3.59□□□□□ -1.83
CSMD3-202ENST00000339701 DYNC1I2Q13409 638 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 BZW1Q7L1Q6 419 aaKnown RBP3.59□□□□□ -1.83
CSMD3-202ENST00000339701 RNF10Q8N5U6 811 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms