RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 B4GALNT4Q76KP1 1039 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF473Q8WTR7 871 aaKnown RBP6.26□□□□□ -1.41
CSDE1-202ENST00000339438 PIK3R5Q8WYR1 880 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 ZBTB10Q96DT7 871 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF570Q96NI8 536 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 MYO6Q9UM54 1294 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 PCDHGC5Q9Y5F6 944 aa6.26□□□□□ -1.41
CSDE1-202ENST00000339438 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SERPINC1P01008 464 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 CMA1P23946 247 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 LSP1P33241 339 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SSR1P43307 286 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 CCT2P78371 535 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PDCLQ13371 301 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 DRP2Q13474 957 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ARMC3Q5W041 872 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PAPD7Q5XG87 772 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 AP1ARQ63HQ0 302 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SHC4Q6S5L8 630 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SPDYE1Q8NFV5 336 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RASSF8Q8NHQ8 419 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PLCD4Q9BRC7 762 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SDF4Q9BRK5 362 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SPATS2LQ9NUQ6 558 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 XDHP47989 1333 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 KIF28PB7ZC32 967 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SNAP23O00161 211 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PSMD14O00487 310 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 TEX33O43247 280 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 MAP3K13O43283 966 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 IPO7O95373 1038 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 FESP07332 822 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ITGA6P23229 1130 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ALDH1B1P30837 517 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SARSP49591 514 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SNCBQ16143 134 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 LACTB2Q53H82 288 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 KDM7AQ6ZMT4 941 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF572Q7Z3I7 529 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 UBE2Q1Q7Z7E8 422 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SIAH1Q8IUQ4 282 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ATL2Q8NHH9 583 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RUFY2Q8WXA3 655 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 EVI5LQ96CN4 794 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 TAOK2Q9UL54 1235 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 MROH5Q6ZUA9 1318 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 IGKV6D-41A0A0C4DH26 115 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PTPDC1A2A3K4 754 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ZPR1O75312 459 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ZMYND10O75800 440 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RTN3O95197 1032 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PDE8BO95263 885 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 CLNS1AP54105 237 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 HDLBPQ00341 1268 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RBL2Q08999 1139 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 PNOCQ13519 176 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 THEMIS2Q5TEJ8 643 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ACRBPQ8NEB7 543 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 MYCBPAPQ8TBZ2 947 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 NAPGQ99747 312 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 RIOK1Q9BRS2 568 aaKnown RBP6.25□□□□□ -1.41
CSDE1-202ENST00000339438 NMRK2Q9NPI5 230 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 HDAC6Q9UBN7 1215 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF652Q9Y2D9 606 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 LEMD3Q9Y2U8 911 aa6.25□□□□□ -1.41
CSDE1-202ENST00000339438 SRRM3A6NNA2 597 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 PPP1R12BO60237 982 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 YEATS4O95619 227 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 PTGISQ16647 500 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 ANKRD20A8PQ5CZ79 823 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 BRAPQ7Z569 592 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 ANKRD23Q86SG2 305 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 AGBL3Q8NEM8 1001 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 HDAC7Q8WUI4 952 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 SPDL1Q96EA4 605 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 HOOK2Q96ED9 719 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 MS4A4AQ96JQ5 239 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 NAA15Q9BXJ9 866 aaKnown RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 MYO1AQ9UBC5 1043 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 KIF26AQ9ULI4 1882 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 COL4A2P08572 1712 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 A0A1B0GUA9 196 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 GOLGA6BA6NDN3 693 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 GOLGA8KD6RF30 607 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 GYPCP04921 128 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 CYP21A2P08686 494 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 ABL2P42684 1182 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 C1QTNF8P60827 252 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 SETQ01105 290 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 PTPAQ15257 358 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 MYSM1Q5VVJ2 828 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 ZC3H15Q8WU90 426 aaKnown RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 TBC1D5Q92609 795 aa6.24□□□□□ -1.41
CSDE1-202ENST00000339438 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF396Q96N95 335 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-202ENST00000339438 BATF3Q9NR55 127 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms