RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 MTFR1Q15390 333 aa14.85□□□□□ -0.03
SRSF3-201ENST00000339436 MCF2L2Q86YR7 1114 aa14.85□□□□□ -0.03
SRSF3-201ENST00000339436 MSL3Q8N5Y2 521 aaKnown RBP14.85□□□□□ -0.03
SRSF3-201ENST00000339436 TINF2Q9BSI4 451 aa14.85□□□□□ -0.03
SRSF3-201ENST00000339436 SYNGAP1Q96PV0 1343 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 CCL5P13501 91 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 IFNAR1P17181 557 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 CALML3P27482 149 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 HSD17B4P51659 736 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 CACNB2Q08289 660 aaPredicted RBP14.84□□□□□ -0.03
SRSF3-201ENST00000339436 MAMDC4Q6UXC1 1216 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
SRSF3-201ENST00000339436 UNC93B1Q9H1C4 597 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
SRSF3-201ENST00000339436 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
SRSF3-201ENST00000339436 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
SRSF3-201ENST00000339436 PFKFB2O60825 505 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 LARGE1O95461 756 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 CYBAP13498 195 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 SCRN1Q12765 414 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 WWC2Q6AWC2 1192 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 HEATR3Q7Z4Q2 680 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 SYTL5Q8TDW5 730 aaPredicted RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 TBC1D5Q92609 795 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.042e-17■□□□□ 8
SRSF3-201ENST00000339436 PHKBQ93100 1093 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 PURBQ96QR8 312 aaKnown RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 PAK6Q9NQU5 681 aaPredicted RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 COL20A1Q9P218 1284 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 ADD3Q9UEY8 706 aaKnown RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 V9GY48 417 aaPredicted RBP14.83□□□□□ -0.04
SRSF3-201ENST00000339436 MYH7BA7E2Y1 1941 aa14.83□□□□□ -0.04
SRSF3-201ENST00000339436 CCDC85CA6NKD9 419 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 hCG_1984214I3L0E3 225 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 CPLX1O14810 134 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 CFBP00751 764 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 ALDH5A1P51649 535 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 ME3Q16798 604 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 PFKFB3Q16875 520 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 PPP1R18Q6NYC8 613 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 ARMCX2Q7L311 632 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 ZNF713Q8N859 430 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 GTF3C6Q969F1 213 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 HMX1Q9NP08 348 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 LOC102724159A0A0B4J2E5 919 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 SCG2P13521 617 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 CCND3P30281 292 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 PWP2Q15269 919 aaKnown RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 TYW1BQ6NUM6 668 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 CPLX2Q6PUV4 134 aaKnown RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 TRPV1Q8NER1 839 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 DNERQ8NFT8 737 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
SRSF3-201ENST00000339436 MAP3K20Q9NYL2 800 aaKnown RBP14.82□□□□□ -0.04
SRSF3-201ENST00000339436 PDE4DIPQ5VU43 2346 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 ASB14A6NK59 587 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 GCOM1H8Y6P7 765 aaPredicted RBP14.81□□□□□ -0.04
SRSF3-201ENST00000339436 STXBP3O00186 592 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 SNAI1O95863 264 aaPredicted RBP14.81□□□□□ -0.04
SRSF3-201ENST00000339436 POLR2MP0CAP2 368 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 HOXA13P31271 388 aaPredicted RBP14.81□□□□□ -0.04
SRSF3-201ENST00000339436 PKN1Q16512 942 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 TRIM22Q8IYM9 498 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 IL27Q8NEV9 243 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 TMEM106CQ9BVX2 250 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
SRSF3-201ENST00000339436 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 ST18O60284 1047 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 CDKL5O76039 1030 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 GJB1P08034 283 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 EDNRBP24530 442 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 NAPAP54920 295 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 AKAP17AQ02040 695 aaKnown RBP14.8□□□□□ -0.04
SRSF3-201ENST00000339436 NECAB1Q8N987 351 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 KATNBL1Q9H079 304 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 ABHD16BQ9H3Z7 469 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 DDX49Q9Y6V7 483 aaKnown RBP14.8□□□□□ -0.04
SRSF3-201ENST00000339436 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
SRSF3-201ENST00000339436 DOCK5Q9H7D0 1870 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 MEIS2O14770 477 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 ZNF865P0CJ78 1059 aaPredicted RBP14.79□□□□□ -0.04
SRSF3-201ENST00000339436 SOX10P56693 466 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 ST3GAL1Q11201 340 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 PRAMEF19Q5SWL8 479 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 NSUN6Q8TEA1 469 aaKnown RBP14.79□□□□□ -0.04
SRSF3-201ENST00000339436 DEFB118Q96PH6 123 aa14.79□□□□□ -0.04
SRSF3-201ENST00000339436 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms