RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 LIMA1Q9UHB6 759 aaKnown RBP18.34■□□□□ 0.53
LITAF-201ENST00000339430 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
LITAF-201ENST00000339430 RNF225M0QZC1 329 aaPredicted RBP18.34■□□□□ 0.53
LITAF-201ENST00000339430 TADA3O75528 432 aa18.34■□□□□ 0.53
LITAF-201ENST00000339430 LRRC15Q8TF66 581 aa18.34■□□□□ 0.53
LITAF-201ENST00000339430 CCDC12Q8WUD4 166 aaPredicted RBP18.34■□□□□ 0.53
LITAF-201ENST00000339430 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
LITAF-201ENST00000339430 CLRN2A0PK11 232 aa18.33■□□□□ 0.53
LITAF-201ENST00000339430 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.53
LITAF-201ENST00000339430 YBX3P16989 372 aaKnown RBP eCLIP18.33■□□□□ 0.53
LITAF-201ENST00000339430 LMNB1P20700 586 aa18.33■□□□□ 0.53
LITAF-201ENST00000339430 CLCN6P51797 869 aa18.33■□□□□ 0.53
LITAF-201ENST00000339430 LETM2Q2VYF4 491 aa18.33■□□□□ 0.53
LITAF-201ENST00000339430 DAGLBQ8NCG7 672 aa18.33■□□□□ 0.53
LITAF-201ENST00000339430 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.52
LITAF-201ENST00000339430 CCNT1O60563 726 aaKnown RBP18.33■□□□□ 0.52
LITAF-201ENST00000339430 PMS1P54277 932 aaKnown RBP18.33■□□□□ 0.52
LITAF-201ENST00000339430 CEP95Q96GE4 821 aa18.33■□□□□ 0.52
LITAF-201ENST00000339430 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.52
LITAF-201ENST00000339430 SRRTQ9BXP5 876 aaKnown RBP18.33■□□□□ 0.52
LITAF-201ENST00000339430 SMCO2A6NFE2 343 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
LITAF-201ENST00000339430 MAP3K9P80192 1104 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 DMTNQ08495 405 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 CNGA4Q8IV77 575 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
LITAF-201ENST00000339430 NAA15Q9BXJ9 866 aaKnown RBP18.32■□□□□ 0.52
LITAF-201ENST00000339430 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
LITAF-201ENST00000339430 PES1O00541 588 aaKnown RBP18.32■□□□□ 0.52
LITAF-201ENST00000339430 TPM1P09493 284 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 ACRBPQ8NEB7 543 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 ANKRD20A12PQ8NF67 263 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 MYOZ2Q9NPC6 264 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 TMOD2Q9NZR1 351 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 MRFAP1Q9Y605 127 aa18.32■□□□□ 0.52
LITAF-201ENST00000339430 ITIH6Q6UXX5 1313 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 TCP10L2B9ZVM9 353 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 SLURP2P0DP57 97 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 RPS12P25398 132 aaKnown RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 UBXN1Q04323 297 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 PPP2R3AQ06190 1150 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 GABPAQ06546 454 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 SH3BP5LQ7L8J4 393 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 ADSSL1Q8N142 457 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 NEDD1Q8NHV4 660 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 EEF2KMTQ96G04 330 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 PIGSQ96S52 555 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 SPZ1Q9BXG8 430 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 ZMYND12Q9H0C1 365 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 ZNF70Q9UC06 446 aaPredicted RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 FRMPD2Q68DX3 1309 aaPredicted RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 EFCAB8A8MWE9 144 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 KLRC4O43908 158 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 NT5C2P49902 561 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 ERVK-24P63145 666 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 SPAG1Q07617 926 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 DHX36Q9H2U1 1008 aaKnown RBP18.31■□□□□ 0.52
LITAF-201ENST00000339430 ABHD10Q9NUJ1 306 aa18.31■□□□□ 0.52
LITAF-201ENST00000339430 USP17L5A8MUK1 530 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 PLCG1P19174 1290 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 TEX35Q5T0J7 233 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 IRF2BP1Q8IU81 584 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 KRT222Q8N1A0 295 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
LITAF-201ENST00000339430 BIN2Q9UBW5 565 aaPredicted RBP18.3■□□□□ 0.52
LITAF-201ENST00000339430 SEC63Q9UGP8 760 aaKnown RBP18.3■□□□□ 0.52
LITAF-201ENST00000339430 WNT10BO00744 389 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 ENTPD3O75355 529 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 ABL1P00519 1130 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 EGFRP00533 1210 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 NONOQ15233 471 aaKnown RBP eCLIP18.3■□□□□ 0.52
LITAF-201ENST00000339430 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 CABP7Q86V35 215 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 MICALL2Q8IY33 904 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 CCSER1Q9C0I3 900 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 VEZTQ9HBM0 779 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 C6orf50Q9HD87 102 aa18.3■□□□□ 0.52
LITAF-201ENST00000339430 OR52Z1P0C646 297 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 TECP42680 631 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 ZNF280AP59817 542 aaPredicted RBP18.29■□□□□ 0.52
LITAF-201ENST00000339430 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 ZBED3Q96IU2 234 aaPredicted RBP18.29■□□□□ 0.52
LITAF-201ENST00000339430 ZSWIM4Q9H7M6 989 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 PI4KBQ9UBF8 816 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 CNOT7Q9UIV1 285 aaKnown RBP18.29■□□□□ 0.52
LITAF-201ENST00000339430 SBF1O95248 1867 aa18.29■□□□□ 0.52
LITAF-201ENST00000339430 H7C1D1 291 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms