RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RRAGBQ5VZM2 374 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CUL5Q93034 780 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 HERC5Q9UII4 1024 aaKnown RBP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 SMTNL1A8MU46 457 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 SERPINC1P01008 464 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 UBASH3AP57075 661 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 SYDE2Q5VT97 1194 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 LRRC8AQ8IWT6 810 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 GMCL1P1Q8NEA9 526 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 TEPSINQ96N21 525 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 ARID3AQ99856 593 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CNOT7Q9UIV1 285 aaKnown RBP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CAP2P40123 477 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CALCRLQ16602 461 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CCDC174Q6PII3 467 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 KCNK18Q7Z418 384 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 CABP7Q86V35 215 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 IGSF22Q8N9C0 903 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 MLKLQ8NB16 471 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.36□□□□□ -1.07
SRFBP1-201ENST00000339397 ZNF541Q9H0D2 1346 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 USP27XA6NNY8 438 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 PHF20L1A8MW92 1017 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 RPN1P04843 607 aaKnown RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 MRPL12P52815 198 aaKnown RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 NBPF12Q5TAG4 269 aaPredicted RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 GSDMAQ96QA5 445 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 CCSER1Q9C0I3 900 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 TMX2Q9Y320 296 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 MYH7BA7E2Y1 1941 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 TRIM49BA6NDI0 452 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 TEX33O43247 280 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 MYO1BO43795 1136 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 KLRC4O43908 158 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 OFD1O75665 1012 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 ZNF18P17022 549 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 CDC25BP30305 580 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 STAT3P40763 770 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 PRPHP41219 470 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 PRCPP42785 496 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 UBXN2AP68543 259 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 GRB10Q13322 594 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 FBXO11Q86XK2 927 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 CREBRFQ8IUR6 639 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 KBTBD4Q9NVX7 518 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 DDX25Q9UHL0 483 aaKnown RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 CTNND2Q9UQB3 1225 aa8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 R3HCC1Q9Y3T6 440 aaKnown RBP8.35□□□□□ -1.07
SRFBP1-201ENST00000339397 PSME4Q14997 1843 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 KIF13BQ9NQT8 1826 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FAM86B1E9PN63 330 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FAM86B2P0C5J1 330 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 CDK11BP21127 795 aaKnown RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 INPP5BP32019 993 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 STAT2P52630 851 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 KMT5BQ4FZB7 885 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FAM83AQ86UY5 434 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 ENOX1Q8TC92 643 aaKnown RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 PNMA5Q96PV4 448 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 AMNQ9BXJ7 453 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 LRWD1Q9UFC0 647 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 HACL1Q9UJ83 578 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 hCG_1984214I3L0E3 225 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FZD9O00144 591 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 LAD1O00515 517 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FCER1AP12319 257 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 TXLNAP40222 546 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 CCZ1BP86790 482 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 CCZ1P86791 482 aaPredicted RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 MCM6Q14566 821 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 APTXQ7Z2E3 356 aaKnown RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 ZNF713Q8N859 430 aaPredicted RBP8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 TRIML1Q8N9V2 468 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 ZNF341Q9BYN7 854 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 ANO3Q9BYT9 981 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 DEFB129Q9H1M3 183 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 VPS33BQ9H267 617 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 BLOC1S4Q9NUP1 217 aa8.34□□□□□ -1.07
SRFBP1-201ENST00000339397 FER1L6Q2WGJ9 1857 aa8.34□□□□□ -1.08
SRFBP1-201ENST00000339397 CFBP00751 764 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 SKILP12757 684 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 ZNF280AP59817 542 aaPredicted RBP8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 STK4Q13043 487 aa8.33□□□□□ -1.08
SRFBP1-201ENST00000339397 PRR16Q569H4 304 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms