RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ARHGAP45Q92619 1136 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 CDKL2Q92772 493 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 TEKT3Q9BXF9 490 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
SHANK2-201ENST00000338508 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.35
SHANK2-201ENST00000338508 FBXO11Q86XK2 927 aa12.83□□□□□ -0.35
SHANK2-201ENST00000338508 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.35
SHANK2-201ENST00000338508 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-201ENST00000338508 NSUN2Q08J23 767 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHANK2-201ENST00000338508 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 PCIF1Q9H4Z3 704 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 GNA14O95837 355 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 Q9H521 79 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 SYNDIG1Q9H7V2 258 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 CLCN1P35523 988 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 PPARAQ07869 468 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
SHANK2-201ENST00000338508 SLC7A5P2Q9GIP4 190 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 NSD2O96028 1365 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 H3BRJ5 948 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 GCKP35557 465 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 THOC5Q13769 683 aaKnown RBP12.83□□□□□ -0.36
SHANK2-201ENST00000338508 KCTD16Q68DU8 428 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 BBS5Q8N3I7 341 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 LZTS2Q9BRK4 669 aa12.83□□□□□ -0.36
SHANK2-201ENST00000338508 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
SHANK2-201ENST00000338508 EVI5O60447 810 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 LRRN2O75325 713 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 STX1BP61266 288 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 NXF1Q9UBU9 619 aaKnown RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TBK1Q9UHD2 729 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 RASIP1Q5U651 963 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 HIP1RO75146 1068 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TOM1L1O75674 476 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 SEC24BO95487 1268 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 YWHAHQ04917 246 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 CROCCP2Q86T23 111 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TMEM232C9JQI7 657 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 ESRRBO95718 433 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 SRGAP2BP0DMP2 458 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TNFAIP1Q13829 316 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 ZNF18P17022 549 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 NCF2P19878 526 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 PMLP29590 882 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 ZKSCAN8Q15776 578 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-201ENST00000338508 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
SHANK2-201ENST00000338508 FAM95CA0A1B0GW59 222 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CFLARO15519 480 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CPP00450 1065 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 HOXC9P31274 260 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ARHGDIAP52565 204 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 SCARA5Q6ZMJ2 495 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 SCYL3Q8IZE3 742 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ANKRD13CQ8N6S4 541 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ARMCX3Q9UH62 379 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 BAG6P46379 1132 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 MYL7Q01449 175 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 PABPC4Q13310 644 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 SNX21Q969T3 373 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 NCOA1Q15788 1441 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 HNRNPDLO14979 420 aaKnown RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 RLBP1P12271 317 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ELF1P32519 619 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 RWDD4Q6NW29 188 aaKnown RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 RASSF7Q02833 373 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 KCNA1Q09470 495 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CCDC84Q86UT8 332 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 NRBP2Q9NSY0 501 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 NSFP46459 744 aaKnown RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CDO1Q16878 200 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 TTC25Q96NG3 672 aa12.81□□□□□ -0.36
SHANK2-201ENST00000338508 TYW1Q9NV66 732 aaKnown RBP12.81□□□□□ -0.36
SHANK2-201ENST00000338508 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms