RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 MTMR4Q9NYA4 1195 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 MRFAP1Q9Y605 127 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 SRGAP2O75044 1071 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 PNMA6AP0CW24 399 aaPredicted RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 MATR3P43243 847 aaKnown RBP eCLIP10.86□□□□□ -0.675e-11■■□□□ 12.5
MSL3-202ENST00000337339 ANKRD13CQ8N6S4 541 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 LRRC15Q8TF66 581 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 P2RX5Q93086 422 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 RAB34Q9BZG1 259 aa10.86□□□□□ -0.67
MSL3-202ENST00000337339 LIMA1Q9UHB6 759 aaKnown RBP10.86□□□□□ -0.67
MSL3-202ENST00000337339 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 MYH15Q9Y2K3 1946 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 PHACTR2O75167 634 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 SLC1A4P43007 532 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 GYS2P54840 703 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 SKIDA1Q1XH10 827 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 SPICE1Q8N0Z3 855 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 NAPGQ99747 312 aaPredicted RBP10.85□□□□□ -0.67
MSL3-202ENST00000337339 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 CRACR2AQ9BSW2 395 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 COL16A1Q07092 1604 aaPredicted RBP10.85□□□□□ -0.67
MSL3-202ENST00000337339 NDUFA10O95299 355 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 GDF11O95390 407 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 TAL1P17542 331 aaPredicted RBP10.85□□□□□ -0.67
MSL3-202ENST00000337339 GALNT17Q6IS24 598 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 IRF2BP1Q8IU81 584 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 ADGRF4Q8IZF3 695 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
MSL3-202ENST00000337339 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
MSL3-202ENST00000337339 UTRNP46939 3433 aa10.85□□□□□ -0.67
MSL3-202ENST00000337339 CTAGE15A4D2H0 777 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 NKRFO15226 690 aaKnown RBP eCLIP10.84□□□□□ -0.67
MSL3-202ENST00000337339 TTLL1O95922 423 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 DMTNQ08495 405 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 TDRD12Q587J7 1177 aaKnown RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 KRT26Q7Z3Y9 468 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CTAGE6Q86UF2 777 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 C2CD5Q86YS7 1000 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 ZFPM1Q8IX07 1006 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CTAGE4Q8IX94 777 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 CCDC42Q96M95 316 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 BICDL2A1A5D9 508 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 TRAF5O00463 557 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 AKR1B10O60218 316 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 ZMYND10O75800 440 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 MRPS25P82663 173 aaKnown RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 CCDC40Q4G0X9 1142 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 LARP4BQ92615 738 aaKnown RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 CCSER1Q9C0I3 900 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 KBTBD4Q9NVX7 518 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 PCDHA12Q9UN75 941 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 LGALS16A8MUM7 142 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 SPA17Q15506 151 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CNNM4Q6P4Q7 775 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CERS5Q8N5B7 392 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 GIMAP8Q8ND71 665 aaPredicted RBP10.84□□□□□ -0.67
MSL3-202ENST00000337339 GLIS3Q8NEA6 775 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 TEKT1Q969V4 418 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 SUGCTQ9HAC7 445 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 CDC23Q9UJX2 597 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 DUSP10Q9Y6W6 482 aa10.84□□□□□ -0.67
MSL3-202ENST00000337339 H2AFXP16104 143 aaPredicted RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 EPS15P42566 896 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 DNM2P50570 870 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 MRPL12P52815 198 aaKnown RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 CT47A1Q5JQC4 288 aaPredicted RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 GPR161Q8N6U8 529 aaKnown RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 TRERF1Q96PN7 1200 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 KIAA1024Q9UPX6 916 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 PCDHA1Q9Y5I3 950 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 LRP5O75197 1615 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 MYMKA6NI61 221 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 MEIS1O00470 390 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 CCNE1P24864 410 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 SRGAP1Q7Z6B7 1085 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
MSL3-202ENST00000337339 DDX12PQ92771 950 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 CCDC102AQ96A19 550 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 CCDC51Q96ER9 411 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 PLEKHA4Q9H4M7 779 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 LAD1O00515 517 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 KLRC4O43908 158 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 RHOBTB3O94955 611 aa10.83□□□□□ -0.68
MSL3-202ENST00000337339 MMP10P09238 476 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms