RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 CALCRLQ16602 461 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 KIAA0895Q8NCT3 520 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
UBA1-201ENST00000335972 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 USP40Q9NVE5 1235 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 SBF2Q86WG5 1849 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 NFIAQ12857 509 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 P2RX5Q93086 422 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
UBA1-201ENST00000335972 ITIH6Q6UXX5 1313 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 MYMKA6NI61 221 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 IL1R1P14778 569 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 OR8K1Q8NGG5 319 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 NOC4LQ9BVI4 516 aaKnown RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 RCCD1A6NED2 376 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 EDIL3O43854 480 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 MARCH6O60337 910 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 KRT26Q7Z3Y9 468 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 DRC1Q96MC2 740 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 POLD4Q9HCU8 107 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 FAM207AQ9NSI2 230 aaPredicted RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 FAM53CQ9NYF3 392 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 GRB10Q13322 594 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 SRGAP1Q7Z6B7 1085 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 GPR161Q8N6U8 529 aaKnown RBP16.61■□□□□ 0.25
UBA1-201ENST00000335972 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
UBA1-201ENST00000335972 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
UBA1-201ENST00000335972 NAPGQ99747 312 aaPredicted RBP16.6■□□□□ 0.25
UBA1-201ENST00000335972 LACRTQ9GZZ8 138 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 UTRNP46939 3433 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 EPHB6O15197 1021 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 ADCY7P51828 1080 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 HERVK_113P62684 666 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 ECM1Q16610 540 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 CCDC122Q5T0U0 273 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
UBA1-201ENST00000335972 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
UBA1-201ENST00000335972 TSR1Q2NL82 804 aaKnown RBP16.59■□□□□ 0.25
UBA1-201ENST00000335972 TMED8Q6PL24 325 aaPredicted RBP16.59■□□□□ 0.25
UBA1-201ENST00000335972 KIAA1328Q86T90 577 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 SNX29Q8TEQ0 813 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 GDAP1L1Q96MZ0 367 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 DBNDD1Q9H9R9 158 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 G3V3G9 751 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 KCNB1Q14721 858 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 DCAF8Q5TAQ9 597 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L15C9J2P7 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L13C9JLJ4 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L11C9JVI0 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L18D6R9N7 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L22D6RA61 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L17D6RBQ6 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L19D6RCP7 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L20D6RJB6 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 ZMYND10O75800 440 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L24Q0WX57 530 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 GALNT17Q6IS24 598 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 RABGGTAQ92696 567 aa16.59■□□□□ 0.25
UBA1-201ENST00000335972 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
UBA1-201ENST00000335972 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.25
UBA1-201ENST00000335972 ATP1A1P05023 1023 aaKnown RBP16.58■□□□□ 0.25
UBA1-201ENST00000335972 CCNE1P24864 410 aa16.58■□□□□ 0.25
UBA1-201ENST00000335972 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.25
UBA1-201ENST00000335972 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 OAS2P29728 719 aaKnown RBP16.58■□□□□ 0.24
UBA1-201ENST00000335972 GABPB1Q06547 395 aaPredicted RBP16.58■□□□□ 0.24
UBA1-201ENST00000335972 LONRF2Q1L5Z9 754 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 SV2BQ7L1I2 683 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 PSMB7Q99436 277 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 THAP9Q9H5L6 903 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 NPHP3-ACAD11A0A0J9YXS1 232 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 PLCG2P16885 1265 aa16.58■□□□□ 0.24
UBA1-201ENST00000335972 EEF1GP26641 437 aaKnown RBP16.58■□□□□ 0.24
UBA1-201ENST00000335972 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBA1-201ENST00000335972 ENOX2Q16206 610 aaKnown RBP16.58■□□□□ 0.24
UBA1-201ENST00000335972 KIAA0825Q8IV33 1275 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms