RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 CPA1P15085 419 aa17.36■□□□□ 0.37
KATNA1-201ENST00000335643 EXOSC10Q01780 885 aaKnown RBP17.36■□□□□ 0.37
KATNA1-201ENST00000335643 RNF20Q5VTR2 975 aa17.36■□□□□ 0.37
KATNA1-201ENST00000335643 PNMA2Q9UL42 364 aa17.36■□□□□ 0.37
KATNA1-201ENST00000335643 ZMYND8Q9ULU4 1186 aaPredicted RBP17.36■□□□□ 0.37
KATNA1-201ENST00000335643 COLQQ9Y215 455 aaPredicted RBP17.36■□□□□ 0.37
KATNA1-201ENST00000335643 CTAGE5O15320 804 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 DUSP11O75319 330 aaKnown RBP17.35■□□□□ 0.37
KATNA1-201ENST00000335643 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 SYN1P17600 705 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 HSPA4P34932 840 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 LIFRP42702 1097 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 CCSAPQ6IQ19 270 aaPredicted RBP17.35■□□□□ 0.37
KATNA1-201ENST00000335643 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
KATNA1-201ENST00000335643 RGS22Q8NE09 1264 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 PIBF1Q8WXW3 757 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 KCNB2Q92953 911 aa17.35■□□□□ 0.37
KATNA1-201ENST00000335643 DDAH1O94760 285 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 SMPD1P17405 629 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 EDNRBP24530 442 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 SYTL5Q8TDW5 730 aaPredicted RBP17.34■□□□□ 0.37
KATNA1-201ENST00000335643 TAAR1Q96RJ0 339 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 AMNQ9BXJ7 453 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
KATNA1-201ENST00000335643 PHF24Q9UPV7 400 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
KATNA1-201ENST00000335643 SNX14Q9Y5W7 946 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 NR2E3Q9Y5X4 410 aa17.34■□□□□ 0.37
KATNA1-201ENST00000335643 CCDC69A6NI79 296 aa17.33■□□□□ 0.37
KATNA1-201ENST00000335643 SLC39A5Q6ZMH5 540 aa17.33■□□□□ 0.37
KATNA1-201ENST00000335643 RNF180Q86T96 592 aa17.33■□□□□ 0.37
KATNA1-201ENST00000335643 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.37
KATNA1-201ENST00000335643 MAP3K14Q99558 947 aa17.33■□□□□ 0.37
KATNA1-201ENST00000335643 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.37
KATNA1-201ENST00000335643 PCDHA1Q9Y5I3 950 aa17.33■□□□□ 0.37
KATNA1-201ENST00000335643 A0A1W2PQ45 241 aaPredicted RBP17.32■□□□□ 0.36
KATNA1-201ENST00000335643 A0A1W2PQY0 241 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
KATNA1-201ENST00000335643 GJA9P57773 515 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 KCNA10Q16322 511 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 DHX32Q7L7V1 743 aaKnown RBP17.32■□□□□ 0.36
KATNA1-201ENST00000335643 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
KATNA1-201ENST00000335643 PRO3102Q9H379 93 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
KATNA1-201ENST00000335643 LTBP2Q14767 1821 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 CFBP00751 764 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 HSD17B4P51659 736 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 ACLYP53396 1101 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 RTP1P59025 263 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 BEX3Q00994 111 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 SNX17Q15036 470 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 DNERQ8NFT8 737 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
KATNA1-201ENST00000335643 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 CST5P28325 142 aaPredicted RBP17.31■□□□□ 0.36
KATNA1-201ENST00000335643 GHRHRQ02643 423 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 TRIM60Q495X7 471 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 TMTC2Q8N394 836 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 SPZ1Q9BXG8 430 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
KATNA1-201ENST00000335643 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
KATNA1-201ENST00000335643 KIAA1217Q5T5P2 1943 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 LOC102724159A0A0B4J2E5 919 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 hCG_1642624A0A1W2PR95 340 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 ASGR1P07306 291 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 HOXA13P31271 388 aaPredicted RBP17.3■□□□□ 0.36
KATNA1-201ENST00000335643 KRT32Q14532 448 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 PWP2Q15269 919 aaKnown RBP17.3■□□□□ 0.36
KATNA1-201ENST00000335643 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
KATNA1-201ENST00000335643 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
KATNA1-201ENST00000335643 MCF2L2Q86YR7 1114 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 JAKMIP1Q96N16 626 aaKnown RBP17.3■□□□□ 0.36
KATNA1-201ENST00000335643 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
KATNA1-201ENST00000335643 RBM47A0AV96 593 aaKnown RBP17.29■□□□□ 0.36
KATNA1-201ENST00000335643 ARIH2O95376 493 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
KATNA1-201ENST00000335643 KIF5BP33176 963 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 NKX3-2P78367 333 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 PDE4DQ08499 809 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 FANCBQ8NB91 859 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 RMDN3Q96TC7 470 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
KATNA1-201ENST00000335643 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 TRIOBPQ9H2D6 2365 aa17.29■□□□□ 0.36
KATNA1-201ENST00000335643 MOXD2PA6NHM9 499 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
KATNA1-201ENST00000335643 REC8O95072 547 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
KATNA1-201ENST00000335643 GNASQ5JWF2 1037 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms