RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ZRANB2O95218 330 aaKnown RBP eCLIP19.82■□□□□ 0.767e-8■■□□□ 14.3
LRCH3-201ENST00000334859 NDUFA10O95299 355 aa19.82■□□□□ 0.76
LRCH3-201ENST00000334859 TMEM266Q2M3C6 531 aa19.82■□□□□ 0.76
LRCH3-201ENST00000334859 ANKRD40Q6AI12 368 aa19.82■□□□□ 0.76
LRCH3-201ENST00000334859 SRGAP1Q7Z6B7 1085 aa19.82■□□□□ 0.76
LRCH3-201ENST00000334859 HPS3Q969F9 1004 aa19.82■□□□□ 0.76
LRCH3-201ENST00000334859 TDP2O95551 362 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 TRIM21P19474 475 aaKnown RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 ARHGAP25P42331 645 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 MTIF2P46199 727 aaKnown RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 TNNI2P48788 182 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 GABPAQ06546 454 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 CNNM4Q6P4Q7 775 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 FAM114A1Q8IWE2 563 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 DNAJC7Q99615 494 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 NAPGQ99747 312 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 SERPINB13Q9UIV8 391 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 EPN1Q9Y6I3 576 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 TTLL1O95922 423 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 ATP2B2Q01814 1243 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 SV2BQ7L1I2 683 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 PCMTD1Q96MG8 357 aaPredicted RBP19.81■□□□□ 0.76
LRCH3-201ENST00000334859 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 PARD6BQ9BYG5 372 aa19.81■□□□□ 0.76
LRCH3-201ENST00000334859 SRGNP10124 158 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 SCNN1DP51172 638 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 TMC4Q7Z404 712 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 SP8Q8IXZ3 490 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 CERS5Q8N5B7 392 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 CEP112Q8N8E3 955 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 MTMR9Q96QG7 549 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 CAPN11Q9UMQ6 739 aa19.8■□□□□ 0.76
LRCH3-201ENST00000334859 POTEMA6NI47 508 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 MPHOSPH10O00566 681 aaKnown RBP19.79■□□□□ 0.76
LRCH3-201ENST00000334859 GRB10Q13322 594 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 CCDC96Q2M329 555 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 SLC27A3Q5K4L6 730 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
LRCH3-201ENST00000334859 KIAA0895Q8NCT3 520 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 ZC3H12CQ9C0D7 883 aaKnown RBP19.79■□□□□ 0.76
LRCH3-201ENST00000334859 SLC39A2Q9NP94 309 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 USP40Q9NVE5 1235 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 SNHG28P0DPA3 235 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 PPP1R2P41236 205 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 TBC1D8BQ0IIM8 1120 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 MCM6Q14566 821 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 UBE2SQ16763 222 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 CC2D1AQ6P1N0 951 aaPredicted RBP19.79■□□□□ 0.76
LRCH3-201ENST00000334859 RAB34Q9BZG1 259 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 MYO1AQ9UBC5 1043 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 GUCA1BQ9UMX6 200 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 REXO2Q9Y3B8 237 aaKnown RBP19.79■□□□□ 0.76
LRCH3-201ENST00000334859 ATP6V0A2Q9Y487 856 aa19.79■□□□□ 0.76
LRCH3-201ENST00000334859 IGKV6D-41A0A0C4DH26 115 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 KLK7P49862 253 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 FXR2P51116 673 aaKnown RBP eCLIP19.78■□□□□ 0.76
LRCH3-201ENST00000334859 ZNF543Q08ER8 600 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 DOK7Q18PE1 504 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 LARP4BQ92615 738 aaKnown RBP19.78■□□□□ 0.76
LRCH3-201ENST00000334859 NOC4LQ9BVI4 516 aaKnown RBP19.78■□□□□ 0.76
LRCH3-201ENST00000334859 ARFGAP3Q9NP61 516 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 TRIM10Q9UDY6 481 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 STK17AQ9UEE5 414 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 TFRCP02786 760 aaKnown RBP19.78■□□□□ 0.76
LRCH3-201ENST00000334859 TUBB2AQ13885 445 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 DYMQ7RTS9 669 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 ADGRF4Q8IZF3 695 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 SNX29Q8TEQ0 813 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 TUBB2BQ9BVA1 445 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 JMJD4Q9H9V9 463 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 BLOC1S4Q9NUP1 217 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 SUGT1Q9Y2Z0 365 aa19.78■□□□□ 0.76
LRCH3-201ENST00000334859 PNMA6FA0A0J9YX94 578 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 KLRG2A4D1S0 409 aaPredicted RBP19.77■□□□□ 0.76
LRCH3-201ENST00000334859 MYMKA6NI61 221 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 ONECUT3O60422 494 aaPredicted RBP19.77■□□□□ 0.76
LRCH3-201ENST00000334859 WDR59Q6PJI9 974 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 PNMA5Q96PV4 448 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 AGPAT5Q9NUQ2 364 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 SWAP70Q9UH65 585 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.76
LRCH3-201ENST00000334859 ADAMTSL1Q8N6G6 1762 aa19.77■□□□□ 0.76
LRCH3-201ENST00000334859 SHMT1P34896 483 aa19.77■□□□□ 0.75
LRCH3-201ENST00000334859 SLC16A2P36021 539 aa19.77■□□□□ 0.75
LRCH3-201ENST00000334859 PLA2G4AP47712 749 aa19.77■□□□□ 0.75
LRCH3-201ENST00000334859 TERF2Q15554 542 aa19.77■□□□□ 0.75
LRCH3-201ENST00000334859 TTBK2Q6IQ55 1244 aa19.77■□□□□ 0.75
LRCH3-201ENST00000334859 ZNHIT6Q9NWK9 470 aaKnown RBP19.77■□□□□ 0.75
LRCH3-201ENST00000334859 G3V3G9 751 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 RAD21O60216 631 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 PPP1R11O60927 126 aaPredicted RBP19.76■□□□□ 0.75
LRCH3-201ENST00000334859 TRIM37O94972 964 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 IDEP14735 1019 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 KRT79Q5XKE5 535 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 PPP1R18Q6NYC8 613 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 NUP58Q9BVL2 599 aa19.76■□□□□ 0.75
LRCH3-201ENST00000334859 SEMA6BQ9H3T3 888 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms