RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 FUCA2Q9BTY2 467 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
APOBEC3B-201ENST00000333467 MYH15Q9Y2K3 1946 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 FIBPO43427 364 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 SLC34A2O95436 690 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 OAZ1P54368 228 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 ZNF792Q3KQV3 632 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 ANO1Q5XXA6 986 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 FAM160B2Q86V87 743 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 FBXL16Q8N461 479 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 GDPD2Q9HCC8 539 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 HOMER2Q9NSB8 354 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
APOBEC3B-201ENST00000333467 ZNF536O15090 1300 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 ZNF213O14771 459 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 SEPT4O43236 478 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 KDM4AO75164 1064 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 COL6A1P12109 1028 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 TOB2Q14106 344 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 PRAMEF19Q5SWL8 479 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3B-201ENST00000333467 DNAJC25-GNG10A0A024R161 153 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 PLA2G6O60733 806 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 FDX1P10109 184 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 TOP1P11387 765 aaKnown RBP12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 CPA1P15085 419 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 LCE2DQ5TA82 110 aaPredicted RBP12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 MTERF4Q7Z6M4 381 aaKnown RBP12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 ESR2Q92731 530 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 ZKSCAN3Q9BRR0 538 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 DIS3Q9Y2L1 958 aaKnown RBP12.73□□□□□ -0.37
APOBEC3B-201ENST00000333467 GOLGA6L4A6NEF3 574 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 DNM1LO00429 736 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 PDHBP11177 359 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 SNAP25P60880 206 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 RBM43Q6ZSC3 357 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 NUP62CLQ9H1M0 184 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 LAMA3Q16787 3333 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 B4E1Z4 1266 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 PFKFB2O60825 505 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 TTBK2Q6IQ55 1244 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 FGD4Q96M96 766 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
APOBEC3B-201ENST00000333467 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
APOBEC3B-201ENST00000333467 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
APOBEC3B-201ENST00000333467 CTAGE5O15320 804 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 ALAS1P13196 640 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 SLC16A2P36021 539 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 SASS6Q6UVJ0 657 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 SPATA32Q96LK8 384 aa12.71□□□□□ -0.38
APOBEC3B-201ENST00000333467 SENP6Q9GZR1 1112 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms