RNA–Protein interactions for RNA: ENST00000332397.6

SPDYE3-201, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE3, Length 3,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-201ENST00000332397 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 VPS18Q9P253 973 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 REXO2Q9Y3B8 237 aaKnown RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 KLRC4O43908 158 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 LDHCP07864 332 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 PLEKP08567 350 aaPredicted RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 SCNN1DP51172 638 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 GSPT2Q8IYD1 628 aaKnown RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 H3BQF6 201 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 CCDC96Q2M329 555 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 CALML4Q96GE6 196 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 FUT8Q9BYC5 575 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 PLEKHA4Q9H4M7 779 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 FAM53CQ9NYF3 392 aa11.75□□□□□ -0.53
SPDYE3-201ENST00000332397 ZNF185O15231 689 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 P2RX5Q93086 422 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 JAKMIP2Q96AA8 810 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 LRWD1Q9UFC0 647 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 FLT1P17948 1338 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 CNTNAP4Q9C0A0 1308 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 LACRTQ9GZZ8 138 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
SPDYE3-201ENST00000332397 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 SLC37A4O43826 429 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 TOM1O60784 492 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 GNA11P29992 359 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 HERVK_113P62684 666 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 CALCRLQ16602 461 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 TTI2Q6NXR4 508 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 SH3GLB2Q9NR46 395 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 TRIM14Q14142 442 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 MEX3CQ5U5Q3 659 aaKnown RBP11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 KBTBD4Q9NVX7 518 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 USP21Q9UK80 565 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 ARID5AQ03989 594 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 NHEJ1Q9H9Q4 299 aaPredicted RBP11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 LEMD3Q9Y2U8 911 aa11.73□□□□□ -0.53
SPDYE3-201ENST00000332397 CCDC151A5D8V7 595 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 ERLIN1O75477 346 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 AKR1B1P15121 316 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 EEF1GP26641 437 aaKnown RBP11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 CXCR5P32302 372 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 CACNB3P54284 484 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 NELFCDQ8IXH7 590 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 G3V3G9 751 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 M0R2N6 131 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 TULP2O00295 520 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 DNM2P50570 870 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 SNAP25P60880 206 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 CCDC42Q96M95 316 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 NLRC4Q9NPP4 1024 aa11.72□□□□□ -0.53
SPDYE3-201ENST00000332397 SMARCAL1Q9NZC9 954 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms