RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 CALML3P27482 149 aa24.2■■□□□ 1.46
YBX1-202ENST00000332220 RPS6P62753 249 aaKnown RBP24.2■■□□□ 1.46
YBX1-202ENST00000332220 TRAF1Q13077 416 aa24.2■■□□□ 1.46
YBX1-202ENST00000332220 RGS22Q8NE09 1264 aa24.2■■□□□ 1.46
YBX1-202ENST00000332220 GPKOWQ92917 476 aaPredicted RBP eCLIP24.2■■□□□ 1.465e-8■■■□□ 19.1
YBX1-202ENST00000332220 NECAB1Q8N987 351 aa24.19■■□□□ 1.46
YBX1-202ENST00000332220 COL20A1Q9P218 1284 aa24.19■■□□□ 1.46
YBX1-202ENST00000332220 CFBP00751 764 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 PRKAR2AP13861 404 aaKnown RBP24.18■■□□□ 1.46
YBX1-202ENST00000332220 UBXN2AP68543 259 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 GHRHRQ02643 423 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 CACNB2Q08289 660 aaPredicted RBP24.18■■□□□ 1.46
YBX1-202ENST00000332220 MAP3K21Q5TCX8 1036 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 MFSD14CQ5VZR4 134 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 WWC2Q6AWC2 1192 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 HEATR3Q7Z4Q2 680 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 ZNF467Q7Z7K2 595 aaPredicted RBP24.18■■□□□ 1.46
YBX1-202ENST00000332220 MCF2L2Q86YR7 1114 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 TINF2Q9BSI4 451 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 UNC93B1Q9H1C4 597 aa24.18■■□□□ 1.46
YBX1-202ENST00000332220 PRPF3O43395 683 aaKnown RBP24.17■■□□□ 1.46
YBX1-202ENST00000332220 DTNBO60941 627 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 CCL5P13501 91 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 HSD17B4P51659 736 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 PKN1Q16512 942 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 TYW1BQ6NUM6 668 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 SYTL5Q8TDW5 730 aaPredicted RBP24.17■■□□□ 1.46
YBX1-202ENST00000332220 SLC26A6Q9BXS9 759 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 RNF26Q9BY78 433 aaPredicted RBP24.17■■□□□ 1.46
YBX1-202ENST00000332220 MAF1Q9H063 256 aa24.17■■□□□ 1.46
YBX1-202ENST00000332220 DDX49Q9Y6V7 483 aaKnown RBP24.17■■□□□ 1.46
YBX1-202ENST00000332220 MYH7BA7E2Y1 1941 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 CPLX1O14810 134 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 ST3GAL1Q11201 340 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 PFKFB3Q16875 520 aaPredicted RBP24.16■■□□□ 1.46
YBX1-202ENST00000332220 MAMDC4Q6UXC1 1216 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 TRPV1Q8NER1 839 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 GTF3C6Q969F1 213 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 LIMCH1Q9UPQ0 1083 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 BRCA2P51587 3418 aa24.16■■□□□ 1.46
YBX1-202ENST00000332220 STXBP3O00186 592 aa24.15■■□□□ 1.46
YBX1-202ENST00000332220 CD2BP2O95400 341 aaKnown RBP24.15■■□□□ 1.46
YBX1-202ENST00000332220 CTDNEP1O95476 244 aa24.15■■□□□ 1.46
YBX1-202ENST00000332220 CCND3P30281 292 aaPredicted RBP24.15■■□□□ 1.46
YBX1-202ENST00000332220 HOXA13P31271 388 aaPredicted RBP24.15■■□□□ 1.46
YBX1-202ENST00000332220 ALDH5A1P51649 535 aaPredicted RBP24.15■■□□□ 1.46
YBX1-202ENST00000332220 PRAMEF19Q5SWL8 479 aa24.15■■□□□ 1.46
YBX1-202ENST00000332220 TAAR1Q96RJ0 339 aa24.15■■□□□ 1.46
YBX1-202ENST00000332220 RPTORQ8N122 1335 aa24.14■■□□□ 1.46
YBX1-202ENST00000332220 SYNGAP1Q96PV0 1343 aa24.14■■□□□ 1.46
YBX1-202ENST00000332220 CCDC85CA6NKD9 419 aa24.14■■□□□ 1.45
YBX1-202ENST00000332220 SNAI1O95863 264 aaPredicted RBP24.14■■□□□ 1.45
YBX1-202ENST00000332220 CYBAP13498 195 aa24.14■■□□□ 1.45
YBX1-202ENST00000332220 SCG2P13521 617 aa24.14■■□□□ 1.45
YBX1-202ENST00000332220 CPLX2Q6PUV4 134 aaKnown RBP24.14■■□□□ 1.45
YBX1-202ENST00000332220 ARMCX2Q7L311 632 aa24.14■■□□□ 1.45
YBX1-202ENST00000332220 MSL3Q8N5Y2 521 aaKnown RBP24.14■■□□□ 1.45
YBX1-202ENST00000332220 RBM27Q9P2N5 1060 aaKnown RBP24.14■■□□□ 1.45
YBX1-202ENST00000332220 GCOM1H8Y6P7 765 aaPredicted RBP24.13■■□□□ 1.45
YBX1-202ENST00000332220 POLR2MP0CAP2 368 aa24.13■■□□□ 1.45
YBX1-202ENST00000332220 NAPAP54920 295 aa24.13■■□□□ 1.45
YBX1-202ENST00000332220 AKAP17AQ02040 695 aaKnown RBP24.13■■□□□ 1.45
YBX1-202ENST00000332220 SSRP1Q08945 709 aaKnown RBP24.13■■□□□ 1.45
YBX1-202ENST00000332220 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.13■■□□□ 1.452e-11■■■■■ 64.9
YBX1-202ENST00000332220 RNF208Q9H0X6 261 aa24.13■■□□□ 1.45
YBX1-202ENST00000332220 HMX1Q9NP08 348 aaPredicted RBP24.13■■□□□ 1.45
YBX1-202ENST00000332220 BARHL2Q9NY43 387 aa24.13■■□□□ 1.45
YBX1-202ENST00000332220 ADD3Q9UEY8 706 aaKnown RBP24.13■■□□□ 1.45
YBX1-202ENST00000332220 hCG_1984214I3L0E3 225 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 ST18O60284 1047 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 TRIM22Q8IYM9 498 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 SAMD3Q8N6K7 520 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 ZNF713Q8N859 430 aaPredicted RBP24.12■■□□□ 1.45
YBX1-202ENST00000332220 DNERQ8NFT8 737 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 SHISA4Q96DD7 197 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.12■■□□□ 1.45
YBX1-202ENST00000332220 MAP3K20Q9NYL2 800 aaKnown RBP24.12■■□□□ 1.45
YBX1-202ENST00000332220 DOCK5Q9H7D0 1870 aa24.12■■□□□ 1.45
YBX1-202ENST00000332220 ASB14A6NK59 587 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 MEIS2O14770 477 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 PPP1R18Q6NYC8 613 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 USP17L6PQ6QN14 398 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 MORC4Q8TE76 937 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 KATNBL1Q9H079 304 aa24.11■■□□□ 1.45
YBX1-202ENST00000332220 PAK6Q9NQU5 681 aaPredicted RBP24.11■■□□□ 1.45
YBX1-202ENST00000332220 POTEFA5A3E0 1075 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 CDKL5O76039 1030 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 ZNF865P0CJ78 1059 aaPredicted RBP24.1■■□□□ 1.45
YBX1-202ENST00000332220 UBE2SQ16763 222 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 FCHSD1Q86WN1 690 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 NSUN7Q8NE18 718 aaKnown RBP24.1■■□□□ 1.45
YBX1-202ENST00000332220 ZSCAN31Q96LW9 406 aaPredicted RBP24.1■■□□□ 1.45
YBX1-202ENST00000332220 AIFM3Q96NN9 605 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 RMDN3Q96TC7 470 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 PSTPIP2Q9H939 334 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 STK36Q9NRP7 1315 aa24.1■■□□□ 1.45
YBX1-202ENST00000332220 PIK3CDO00329 1044 aa24.09■■□□□ 1.45
YBX1-202ENST00000332220 EDNRBP24530 442 aa24.09■■□□□ 1.45
YBX1-202ENST00000332220 SOX10P56693 466 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms