RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 STAT3P40763 770 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 CLK2P49760 499 aaKnown RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 RILPL1Q5EBL4 403 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 XRRA1Q6P2D8 792 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 ABRAQ8N0Z2 381 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 ATG4CQ96DT6 458 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 CCPG1Q9ULG6 757 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 PPP1R11O60927 126 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 HSD17B4P51659 736 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 RESTQ13127 1097 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 NPY5RQ15761 445 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 MOXD1Q6UVY6 613 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 NOSTRINQ8IVI9 506 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 DIS3L2Q8IYB7 885 aaKnown RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 REXO1Q8N1G1 1221 aaKnown RBP10.84□□□□□ -0.67
C11orf54-201ENST00000331239 TNFRSF25Q93038 417 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 FBXO28Q9NVF7 368 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 VPS54Q9P1Q0 977 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 CFAP45Q9UL16 551 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 ZKSCAN5Q9Y2L8 839 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 PFASO15067 1338 aa10.84□□□□□ -0.67
C11orf54-201ENST00000331239 GCOM1H8Y6P7 765 aaPredicted RBP10.83□□□□□ -0.68
C11orf54-201ENST00000331239 POLR2MP0CAP2 368 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 NOM1Q5C9Z4 860 aaKnown RBP10.83□□□□□ -0.68
C11orf54-201ENST00000331239 RASGRP2Q7LDG7 609 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 ADGRA2Q96PE1 1338 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 B4DLN1 442 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 STRNO43815 780 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 ZNF500O60304 480 aaPredicted RBP10.83□□□□□ -0.68
C11orf54-201ENST00000331239 USP11P51784 963 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 DNM1Q05193 864 aaKnown RBP10.83□□□□□ -0.68
C11orf54-201ENST00000331239 GNL2Q13823 731 aaKnown RBP10.83□□□□□ -0.68
C11orf54-201ENST00000331239 FAM110CQ1W6H9 321 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 ACAD9Q9H845 621 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 ZFYVE28Q9HCC9 887 aa10.83□□□□□ -0.68
C11orf54-201ENST00000331239 OFD1O75665 1012 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 TMEM132BQ14DG7 1078 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 UVSSAQ2YD98 709 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 CPVLQ9H3G5 476 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
C11orf54-201ENST00000331239 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 ZNF236Q9UL36 1845 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 CYP3A4P08684 503 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 GCFC2P16383 781 aaKnown RBP10.82□□□□□ -0.68
C11orf54-201ENST00000331239 CLEC4DQ8WXI8 215 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
C11orf54-201ENST00000331239 CAPNS2Q96L46 248 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 TRERF1Q96PN7 1200 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 SCAND2PQ9GZW5 306 aaPredicted RBP10.82□□□□□ -0.68
C11orf54-201ENST00000331239 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 PCDHA6Q9UN73 950 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 PCDHA8Q9Y5H6 950 aa10.82□□□□□ -0.68
C11orf54-201ENST00000331239 PCNTO95613 3336 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 CCDC194A0A1B0GVG4 234 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 LAD1O00515 517 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 CA12O43570 354 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 DTNBO60941 627 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 CNMDO75829 334 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 STAM2O75886 525 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 TPM2P07951 284 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 MAPK4P31152 587 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 IRF5Q13568 498 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 NONOQ15233 471 aaKnown RBP eCLIP10.81□□□□□ -0.68
C11orf54-201ENST00000331239 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
C11orf54-201ENST00000331239 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 COA7Q96BR5 231 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 MPHOSPH6Q99547 160 aaKnown RBP10.81□□□□□ -0.68
C11orf54-201ENST00000331239 PTPN18Q99952 460 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 SAGE1Q9NXZ1 904 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 MEIS2O14770 477 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 ERVK-24P63145 666 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 KRT85P78386 507 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 CCDC174Q6PII3 467 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 DNERQ8NFT8 737 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 SMCR8Q8TEV9 937 aaPredicted RBP10.81□□□□□ -0.68
C11orf54-201ENST00000331239 RNF146Q9NTX7 359 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
C11orf54-201ENST00000331239 ELP1O95163 1332 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 CYP3A7-CYP3A51PA0A087WV96 503 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 TLR2O60603 784 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 YEATS4O95619 227 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 PTMAP06454 111 aaKnown RBP10.8□□□□□ -0.68
C11orf54-201ENST00000331239 BCRP11274 1271 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 CYP3A7P24462 503 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 MYSM1Q5VVJ2 828 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 PPP4R3AQ6IN85 833 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 NIPA1Q7RTP0 329 aa10.8□□□□□ -0.68
C11orf54-201ENST00000331239 SHISA4Q96DD7 197 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms