RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ADARB2Q9NS39 739 aaKnown RBP17.89■□□□□ 0.45
PDGFB-201ENST00000331163 ABT1Q9ULW3 272 aaKnown RBP17.89■□□□□ 0.45
PDGFB-201ENST00000331163 CCT6AP40227 531 aaKnown RBP17.88■□□□□ 0.45
PDGFB-201ENST00000331163 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 KIAA1755Q5JYT7 1200 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 LDHDQ86WU2 507 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 CPLX3Q8WVH0 158 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 POLR3EQ9NVU0 708 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 PCDHA12Q9UN75 941 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 SCN7AQ01118 1682 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 UVSSAQ2YD98 709 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 SHC4Q6S5L8 630 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 CYP2W1Q8TAV3 490 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 NYAP2Q9P242 653 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 TNNT1P13805 278 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 IREB2P48200 963 aaKnown RBP17.88■□□□□ 0.45
PDGFB-201ENST00000331163 KRT79Q5XKE5 535 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 TPH2Q8IWU9 490 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 DPF2Q92785 391 aa17.88■□□□□ 0.45
PDGFB-201ENST00000331163 GTPBP4Q9BZE4 634 aaKnown RBP17.88■□□□□ 0.45
PDGFB-201ENST00000331163 GCOM1H8Y6P7 765 aaPredicted RBP17.87■□□□□ 0.45
PDGFB-201ENST00000331163 POLR2MP0CAP2 368 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 ZNF280CQ8ND82 737 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 NAT10Q9H0A0 1025 aaKnown RBP17.87■□□□□ 0.45
PDGFB-201ENST00000331163 AS3MTQ9HBK9 375 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 CUTAO60888 179 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 CELF2O95319 508 aaKnown RBP17.87■□□□□ 0.45
PDGFB-201ENST00000331163 UTP14CQ5TAP6 766 aaKnown RBP17.87■□□□□ 0.45
PDGFB-201ENST00000331163 CLSTN2Q9H4D0 955 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 PCDHA5Q9Y5H7 936 aa17.87■□□□□ 0.45
PDGFB-201ENST00000331163 FZD9O00144 591 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 LETM1O95202 739 aaPredicted RBP17.86■□□□□ 0.45
PDGFB-201ENST00000331163 KIAA1524Q8TCG1 905 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 ANO3Q9BYT9 981 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 TCHHQ07283 1943 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 LY75O60449 1722 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 ABCB11O95342 1321 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 ANO10Q9NW15 660 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 TRMT1Q9NXH9 659 aaKnown RBP17.86■□□□□ 0.45
PDGFB-201ENST00000331163 GRIN3BO60391 1043 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 CABP7Q86V35 215 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 CCDC47Q96A33 483 aaKnown RBP17.86■□□□□ 0.45
PDGFB-201ENST00000331163 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 RAB34Q9BZG1 259 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 CHD4Q14839 1912 aa17.86■□□□□ 0.45
PDGFB-201ENST00000331163 BACH1O14867 736 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 DPCR1Q3MIW9 517 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 ELP1O95163 1332 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 NFIBO00712 420 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 ARHGEF16Q5VV41 709 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 VCAM1P19320 739 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 VGLL4Q14135 290 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 IQUBQ8NA54 791 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 CCDC112Q8NEF3 446 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 SPZ1Q9BXG8 430 aa17.85■□□□□ 0.45
PDGFB-201ENST00000331163 SEPT14Q6ZU15 432 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 PRPF38AQ8NAV1 312 aaKnown RBP17.84■□□□□ 0.45
PDGFB-201ENST00000331163 SHISA4Q96DD7 197 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 STK36Q9NRP7 1315 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 IRF6O14896 467 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 FUT2Q10981 343 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 ENOX2Q16206 610 aaKnown RBP17.84■□□□□ 0.45
PDGFB-201ENST00000331163 C11orf57Q6ZUT1 292 aaPredicted RBP17.84■□□□□ 0.45
PDGFB-201ENST00000331163 FAM83AQ86UY5 434 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 DCAF4Q8WV16 495 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 MMRN2Q9H8L6 949 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 CMA1P23946 247 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 STX1AQ16623 288 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 EHD4Q9H223 541 aa17.84■□□□□ 0.45
PDGFB-201ENST00000331163 PRR29P0C7W0 189 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 PABPC4Q13310 644 aaKnown RBP eCLIP17.83■□□□□ 0.45
PDGFB-201ENST00000331163 ARMC9Q7Z3E5 817 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 ZBTB9Q96C00 473 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 CBX8Q9HC52 389 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 RNF146Q9NTX7 359 aa17.83■□□□□ 0.45
PDGFB-201ENST00000331163 PPP1R11O60927 126 aaPredicted RBP17.83■□□□□ 0.44
PDGFB-201ENST00000331163 SLC37A4O43826 429 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 POSTNQ15063 836 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 SIAH1Q8IUQ4 282 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 PIGOQ8TEQ8 1089 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 KIAA1024Q9UPX6 916 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 MRPL11Q9Y3B7 192 aaKnown RBP17.82■□□□□ 0.44
PDGFB-201ENST00000331163 IQCA1LA6NCM1 817 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 SFI1A8K8P3 1242 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 CTNND1O60716 968 aaKnown RBP17.82■□□□□ 0.44
PDGFB-201ENST00000331163 FGRP09769 529 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
PDGFB-201ENST00000331163 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 SCYL3Q8IZE3 742 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 GINS2Q9Y248 185 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 TMX2Q9Y320 296 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 GAS7O60861 476 aa17.82■□□□□ 0.44
PDGFB-201ENST00000331163 CYP2C8P10632 490 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms