RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ATRNO75882 1429 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 ZNF263O14978 683 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 SPATS2LQ9NUQ6 558 aaKnown RBP26.93■■□□□ 1.9
SOX1-201ENST00000330949 EHD2Q9NZN4 543 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 PCDHA13Q9Y5I0 950 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 DISP2A7MBM2 1401 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 SOS2Q07890 1332 aaPredicted RBP26.93■■□□□ 1.9
SOX1-201ENST00000330949 TRIM49BA6NDI0 452 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 B4DLN1 442 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 PPP1R12BO60237 982 aaPredicted RBP26.93■■□□□ 1.9
SOX1-201ENST00000330949 GCKP35557 465 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 GUCY2FP51841 1108 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 MSL1Q68DK7 614 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 ADSSL1Q8N142 457 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 CNNM2Q9H8M5 875 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 TSKSQ9UJT2 592 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 PLAAQ9Y263 795 aa26.93■■□□□ 1.9
SOX1-201ENST00000330949 FAM205CA6NFA0 338 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 IDH1O75874 414 aaKnown RBP26.92■■□□□ 1.9
SOX1-201ENST00000330949 GHRP10912 638 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 ICA1Q05084 483 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 LRIG3Q6UXM1 1119 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 ZNF483Q8TF39 744 aaPredicted RBP26.92■■□□□ 1.9
SOX1-201ENST00000330949 LEMD3Q9Y2U8 911 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 A0A0G2JS52 829 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 C5orf60A6NFR6 353 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 GCOM1H8Y6P7 765 aaPredicted RBP26.92■■□□□ 1.9
SOX1-201ENST00000330949 MYZAPP0CAP1 466 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 NOC3LQ8WTT2 800 aaKnown RBP26.92■■□□□ 1.9
SOX1-201ENST00000330949 MTRQ99707 1265 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 RIPOR2Q9Y4F9 1068 aa26.92■■□□□ 1.9
SOX1-201ENST00000330949 LRP6O75581 1613 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 A0A1W2PQJ5 194 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 KLHL33A6NCF5 533 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 KRT2P35908 639 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 KRT26Q7Z3Y9 468 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 KDM4CQ9H3R0 1056 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 SLC12A6Q9UHW9 1150 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 TNS3Q68CZ2 1445 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 ATP6V1G2O95670 118 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 CDC37Q16543 378 aaPredicted RBP26.91■■□□□ 1.9
SOX1-201ENST00000330949 FIGNQ5HY92 759 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 METTL24Q5JXM2 366 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 HELBQ8NG08 1087 aaPredicted RBP26.91■■□□□ 1.9
SOX1-201ENST00000330949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.91■■□□□ 1.9
SOX1-201ENST00000330949 TRIM47Q96LD4 638 aa26.91■■□□□ 1.9
SOX1-201ENST00000330949 MYH6P13533 1939 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 GKAP1Q5VSY0 366 aaPredicted RBP26.9■■□□□ 1.9
SOX1-201ENST00000330949 KIRREL3Q8IZU9 778 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 CUL5Q93034 780 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 IQCDQ96DY2 449 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 PCMTD1Q96MG8 357 aaPredicted RBP26.9■■□□□ 1.9
SOX1-201ENST00000330949 TUBGCP2Q9BSJ2 902 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 NOD2Q9HC29 1040 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 ASAP1Q9ULH1 1129 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 ESYT3A0FGR9 886 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 HSPA9P38646 679 aaKnown RBP26.9■■□□□ 1.9
SOX1-201ENST00000330949 CRELD2Q6UXH1 353 aaPredicted RBP26.9■■□□□ 1.9
SOX1-201ENST00000330949 DNAJC10Q8IXB1 793 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 PLCB1Q9NQ66 1216 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 GLI3P10071 1580 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 KIF1AQ12756 1690 aa26.9■■□□□ 1.9
SOX1-201ENST00000330949 SNAP23O00161 211 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 BUB1BO60566 1050 aaPredicted RBP26.89■■□□□ 1.9
SOX1-201ENST00000330949 RCAN1P53805 252 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 IFIT5Q13325 482 aaKnown RBP26.89■■□□□ 1.9
SOX1-201ENST00000330949 HVCN1Q96D96 273 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 KRT23Q9C075 422 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 OPLAHO14841 1288 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 LDHAL6AQ6ZMR3 332 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 SH3GL3Q99963 347 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 EBF2Q9HAK2 575 aa26.89■■□□□ 1.9
SOX1-201ENST00000330949 PCDH11XQ9BZA7 1347 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 PCDH11YQ9BZA8 1340 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 RASSF10A6NK89 507 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 ELF3P78545 371 aaPredicted RBP26.89■■□□□ 1.89
SOX1-201ENST00000330949 ATP2C1P98194 919 aaPredicted RBP26.89■■□□□ 1.89
SOX1-201ENST00000330949 BIRC3Q13489 604 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 WTAPQ15007 396 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 QPCTQ16769 361 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 CADPS2Q86UW7 1296 aa26.89■■□□□ 1.89
SOX1-201ENST00000330949 CMTR1Q8N1G2 835 aaKnown RBP26.89■■□□□ 1.89
SOX1-201ENST00000330949 STRCP1A6NGW2 1772 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 PSMA7O14818 248 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 SLMAPQ14BN4 828 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 TLR10Q9BXR5 811 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 RNF26Q9BY78 433 aaPredicted RBP26.88■■□□□ 1.89
SOX1-201ENST00000330949 UBE3CQ15386 1083 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 ZNF174Q15697 407 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 ALX1Q15699 326 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 CCT6BQ92526 530 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 SPDL1Q96EA4 605 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 FBXO3Q9UK99 471 aa26.88■■□□□ 1.89
SOX1-201ENST00000330949 CHD4Q14839 1912 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 ZSCAN5CA6NGD5 496 aaPredicted RBP26.87■■□□□ 1.89
SOX1-201ENST00000330949 PAEPP09466 180 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 HNRNPH3P31942 346 aaKnown RBP26.87■■□□□ 1.89
SOX1-201ENST00000330949 PTGDRQ13258 359 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 RUFY4Q6ZNE9 571 aa26.87■■□□□ 1.89
SOX1-201ENST00000330949 BRINP3Q76B58 766 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms