RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ATRNO75882 1429 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
SOCS3-201ENST00000330871 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
SOCS3-201ENST00000330871 TATDN2Q93075 761 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 MTRQ99707 1265 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 SLC39A2Q9NP94 309 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 MYH7P12883 1935 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 TRIM75PA6NK02 468 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 IFFO1Q0D2I5 559 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 CHRNA2Q15822 529 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 GLE1Q53GS7 698 aaKnown RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 CACNA2D3Q8IZS8 1091 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 ZNF507Q8TCN5 953 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 TCP11Q8WWU5 503 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 CUL5Q93034 780 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 FAM89AQ96GI7 184 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 ZNF532Q9HCE3 1301 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 C1orf167Q5SNV9 1468 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 RASSF10A6NK89 507 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 PHF20L1A8MW92 1017 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 TRAPPC3O43617 180 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 TNFRSF8P28908 595 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 RNASE9P60153 205 aaKnown RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 PAK2Q13177 524 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 SPA17Q15506 151 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 BZW1Q7L1Q6 419 aaKnown RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 NOC3LQ8WTT2 800 aaKnown RBP20.19■□□□□ 0.82
SOCS3-201ENST00000330871 CCDC42Q96M95 316 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 SH3GL3Q99963 347 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 ZKSCAN3Q9BRR0 538 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
SOCS3-201ENST00000330871 ADCY2Q08462 1091 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 ALX1Q15699 326 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 CASKIN2Q8WXE0 1202 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 HOOK2Q96ED9 719 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 GDF3Q9NR23 364 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 TCP1P17987 556 aaKnown RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 ZNF174Q15697 407 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 CDCA2Q69YH5 1023 aaPredicted RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 CD302Q8IX05 232 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 SH2D4AQ9H788 454 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 PKD1L3Q7Z443 1732 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 GOLGA6L10A6NI86 522 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 ERVV-2B6SEH9 535 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 CLTAP09496 248 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 ODF2Q5BJF6 829 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 TYW1BQ6NUM6 668 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 STRBPQ96SI9 672 aaKnown RBP20.18■□□□□ 0.82
SOCS3-201ENST00000330871 TMBIM4Q9HC24 238 aa20.18■□□□□ 0.82
SOCS3-201ENST00000330871 ANP32DO95626 131 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 SNX1Q13596 522 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 CCDC170Q8IYT3 715 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 SPDYE1Q8NFV5 336 aaPredicted RBP20.17■□□□□ 0.82
SOCS3-201ENST00000330871 SAAL1Q96ER3 474 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 ETAA1Q9NY74 926 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 SALL4Q9UJQ4 1053 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 A0A1W2PQC6 194 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 hCG_1642624A0A1W2PR95 340 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 USO1O60763 962 aaKnown RBP20.17■□□□□ 0.82
SOCS3-201ENST00000330871 PDE6AP16499 860 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 CCT6BQ92526 530 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 CNOT8Q9UFF9 292 aaKnown RBP20.17■□□□□ 0.82
SOCS3-201ENST00000330871 SLC12A6Q9UHW9 1150 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 PCDHA13Q9Y5I0 950 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 ALS2Q96Q42 1657 aa20.17■□□□□ 0.82
SOCS3-201ENST00000330871 BUB1O43683 1085 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 CAPRIN2Q6IMN6 1127 aaKnown RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 ZBTB38Q8NAP3 1195 aaPredicted RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 RAPGEF5Q92565 580 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 KRT12Q99456 494 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 TSGA10Q9BZW7 698 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 COL18A1P39060 1754 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 EIF4E1BA6NMX2 242 aaKnown RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 SEMA3FQ13275 785 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 CDC37Q16543 378 aaPredicted RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 ZNF658Q5TYW1 1059 aaPredicted RBP20.16■□□□□ 0.82
SOCS3-201ENST00000330871 CPLX4Q7Z7G2 160 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 ARFGAP2Q8N6H7 521 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 SPAG5Q96R06 1193 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 TTYH3Q9C0H2 523 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 CNNM2Q9H8M5 875 aa20.16■□□□□ 0.82
SOCS3-201ENST00000330871 RIC1Q4ADV7 1423 aa20.15■□□□□ 0.82
SOCS3-201ENST00000330871 H7C1D1 291 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms