RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MYH7BA7E2Y1 1941 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 TXKP42681 527 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 FANCCQ00597 558 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 CCDC84Q86UT8 332 aaPredicted RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 ENOX1Q8TC92 643 aaKnown RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 XPO4Q9C0E2 1151 aaKnown RBP19.16■□□□□ 0.66
DDX41-201ENST00000330503 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 IFNKQ9P0W0 207 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 DACH1Q9UI36 760 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 ZNF541Q9H0D2 1346 aa19.16■□□□□ 0.66
DDX41-201ENST00000330503 PPP1R3GB7ZBB8 358 aa19.15■□□□□ 0.66
DDX41-201ENST00000330503 OPLAHO14841 1288 aa19.15■□□□□ 0.66
DDX41-201ENST00000330503 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.66
DDX41-201ENST00000330503 USH1GQ495M9 461 aa19.15■□□□□ 0.66
DDX41-201ENST00000330503 KBTBD4Q9NVX7 518 aa19.15■□□□□ 0.66
DDX41-201ENST00000330503 ERCC5P28715 1186 aaPredicted RBP19.14■□□□□ 0.65
DDX41-201ENST00000330503 STAT2P52630 851 aa19.14■□□□□ 0.65
DDX41-201ENST00000330503 CT47A1Q5JQC4 288 aaPredicted RBP19.14■□□□□ 0.65
DDX41-201ENST00000330503 HAS1Q92839 578 aa19.14■□□□□ 0.65
DDX41-201ENST00000330503 DDX25Q9UHL0 483 aaKnown RBP19.14■□□□□ 0.65
DDX41-201ENST00000330503 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
DDX41-201ENST00000330503 ASNSP08243 561 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 PLCG1P19174 1290 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 TNFAIP1Q13829 316 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 ZYXQ15942 572 aaKnown RBP19.13■□□□□ 0.65
DDX41-201ENST00000330503 TRMT44Q8IYL2 757 aaKnown RBP19.13■□□□□ 0.65
DDX41-201ENST00000330503 ANO3Q9BYT9 981 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 RPN1P04843 607 aaKnown RBP19.13■□□□□ 0.65
DDX41-201ENST00000330503 USP11P51784 963 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 PDIA5Q14554 519 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 SMYD4Q8IYR2 804 aaPredicted RBP19.13■□□□□ 0.65
DDX41-201ENST00000330503 CRYGNQ8WXF5 182 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 PYCARDQ9ULZ3 195 aa19.13■□□□□ 0.65
DDX41-201ENST00000330503 CYP3A7-CYP3A51PA0A087WV96 503 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 PLA2G6O60733 806 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 ZNF18P17022 549 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 CYP3A7P24462 503 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 RASSF8Q8NHQ8 419 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 MBOAT7Q96N66 472 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 LRWD1Q9UFC0 647 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 SMCHD1A6NHR9 2005 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 GCFC2P16383 781 aaKnown RBP19.12■□□□□ 0.65
DDX41-201ENST00000330503 LRMPQ12912 555 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 AP3B2Q13367 1082 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 KIF4BQ2VIQ3 1234 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 CHURC1Q8WUH1 139 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 CACTINQ8WUQ7 758 aaKnown RBP19.12■□□□□ 0.65
DDX41-201ENST00000330503 DEFB129Q9H1M3 183 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 SH2D4AQ9H788 454 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 NFE2L3Q9Y4A8 694 aa19.12■□□□□ 0.65
DDX41-201ENST00000330503 GRB10Q13322 594 aa19.11■□□□□ 0.65
DDX41-201ENST00000330503 ARID5BQ14865 1188 aa19.11■□□□□ 0.65
DDX41-201ENST00000330503 GJA10Q969M2 543 aa19.11■□□□□ 0.65
DDX41-201ENST00000330503 NAP1L5Q96NT1 182 aaPredicted RBP19.11■□□□□ 0.65
DDX41-201ENST00000330503 PNMA5Q96PV4 448 aa19.11■□□□□ 0.65
DDX41-201ENST00000330503 RANBP17Q9H2T7 1088 aaKnown RBP19.11■□□□□ 0.65
DDX41-201ENST00000330503 CUEDC2Q9H467 287 aa19.11■□□□□ 0.65
DDX41-201ENST00000330503 KLRC4O43908 158 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 NBPF12Q5TAG4 269 aaPredicted RBP19.1■□□□□ 0.65
DDX41-201ENST00000330503 C17orf53Q8N3J3 647 aaPredicted RBP19.1■□□□□ 0.65
DDX41-201ENST00000330503 KIFC2Q96AC6 838 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 NAP1L4Q99733 375 aaKnown RBP19.1■□□□□ 0.65
DDX41-201ENST00000330503 TMEM266Q2M3C6 531 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 MCTP2Q6DN12 878 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 KIAA1524Q8TCG1 905 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 NUDT12Q9BQG2 462 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 ZNF341Q9BYN7 854 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 SAMSN1Q9NSI8 373 aaKnown RBP19.1■□□□□ 0.65
DDX41-201ENST00000330503 FBXO28Q9NVF7 368 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 ATAD5Q96QE3 1844 aa19.1■□□□□ 0.65
DDX41-201ENST00000330503 POTEMA6NI47 508 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 STX17P56962 302 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 UBASH3AP57075 661 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 ZNF658Q5TYW1 1059 aaPredicted RBP19.09■□□□□ 0.65
DDX41-201ENST00000330503 KLHL10Q6JEL2 608 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 CCDC174Q6PII3 467 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 MAGEF1Q9HAY2 307 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 RMND1Q9NWS8 449 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 FEM1BQ9UK73 627 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
DDX41-201ENST00000330503 SERPINC1P01008 464 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 FOSP01100 380 aaPredicted RBP19.09■□□□□ 0.65
DDX41-201ENST00000330503 MYL1P05976 194 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 HOXA13P31271 388 aaPredicted RBP19.09■□□□□ 0.65
DDX41-201ENST00000330503 INPP5BP32019 993 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 ARHGAP4P98171 946 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 HSP90AA4PQ58FG1 418 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 SPATA1Q5VX52 437 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 ARHGAP27Q6ZUM4 889 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 FILIP1Q7Z7B0 1213 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 FAM160B2Q86V87 743 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 TBC1D5Q92609 795 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 CALML4Q96GE6 196 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 C7orf25Q9BPX7 421 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 KCNMB3Q9NPA1 279 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 BLOC1S4Q9NUP1 217 aa19.09■□□□□ 0.65
DDX41-201ENST00000330503 H7C1D1 291 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 PIK3CDO00329 1044 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 KCNB1Q14721 858 aa19.08■□□□□ 0.64
DDX41-201ENST00000330503 KMT5BQ4FZB7 885 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms