RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 EPHX1P07099 455 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 MED14OSP0DP75 135 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 RBM25P49756 843 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 GALK1P51570 392 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 RBM10P98175 930 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 TMEM62Q0P6H9 643 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 PPP2R5DQ14738 602 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 TNNI3KQ59H18 835 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 TMEM132EQ6IEE7 984 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 CRACR2BQ8N4Y2 399 aaPredicted RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 NUP43Q8NFH3 380 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 KCNN1Q92952 543 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 P2RX7Q99572 595 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 PLCD4Q9BRC7 762 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 ZNF552Q9H707 407 aaPredicted RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 SUGT1Q9Y2Z0 365 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 NCOA1Q15788 1441 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 PLA2R1Q13018 1463 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 ZCCHC6Q5VYS8 1495 aaKnown RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 ABLIM1O14639 778 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 FGF10O15520 208 aaPredicted RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 C1QTNF9P0C862 333 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 NCAPHQ15003 741 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 KIAA1211LQ6NV74 962 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 ATG14Q6ZNE5 492 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 FAM169BQ8N8A8 192 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 ZSCAN18Q8TBC5 510 aaPredicted RBP2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 KLHL6Q8WZ60 621 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 MCOLN1Q9GZU1 580 aa2.61□□□□□ -1.99
CCDC144A-201ENST00000328495 TEX51A0A1B0GUA7 166 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ANKRD34BA5PLL1 514 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ETV2O00321 342 aaPredicted RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 TBC1D8O95759 1140 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 MPOP05164 745 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 PRKCAP17252 672 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ZNF143P52747 638 aaPredicted RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 CYP4F8P98187 520 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 GRB10Q13322 594 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 KRTAP21-3Q3LHN1 58 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 FGD4Q96M96 766 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 JMJD8Q96S16 334 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 KCNK12Q9HB15 430 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ACTR10Q9NZ32 417 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 IMPACTQ9P2X3 320 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 CGGBP1Q9UFW8 167 aaPredicted RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 TSPOAP1O95153 1857 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 EFEMP2O95967 443 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 IFNGR1P15260 489 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ERVFRD-1P60508 538 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 AMPD2Q01433 879 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 EEF1DP3Q658K8 133 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 RCSD1Q6JBY9 416 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 POMZP3Q6PJE2 187 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ZNF428Q96B54 188 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 RCC1LQ96I51 464 aaKnown RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 PTCHD1Q96NR3 888 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 FCRL3Q96P31 734 aaPredicted RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 CD320Q9NPF0 282 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ACSL6Q9UKU0 697 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 MYOCOSA0A1B0GUC4 107 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 A0A1W2PQJ5 194 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 NPIPB6E9PJ23 425 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 AURKAO14965 403 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 DLG4P78352 724 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 SRSF3P84103 164 aaKnown RBP2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 ARID5AQ03989 594 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 KCNA10Q16322 511 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 KRTAP19-4Q3LI73 84 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 APBA2Q99767 749 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 TNFRSF12AQ9NP84 129 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 SIRT5Q9NXA8 310 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 PODXL2Q9NZ53 605 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 BACE2Q9Y5Z0 518 aa2.6□□□□□ -1.99
CCDC144A-201ENST00000328495 SETD1BQ9UPS6 1966 aaKnown RBP2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 RREB1Q92766 1687 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 TCOF1Q13428 1488 aaKnown RBP2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 STXBP3O00186 592 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 SMAD7O15105 426 aaKnown RBP2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 KRT1P04264 644 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 SEPHS1P49903 392 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 CORO7P57737 925 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 RAB3GAP1Q15042 981 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 CIAPIN1Q6FI81 312 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 LRRC56Q8IYG6 542 aaPredicted RBP2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 ARHGEF39Q8N4T4 335 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 TMEM52Q8NDY8 209 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 TINF2Q9BSI4 451 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 PRKAG3Q9UGI9 489 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 MRVI1Q9Y6F6 885 aa2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 SCAF11Q99590 1463 aaKnown RBP2.59□□□□□ -1.99
CCDC144A-201ENST00000328495 TRBV23OR9-2A0A075B6M9 112 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 NOP56O00567 594 aaKnown RBP2.59□□□□□ -2
CCDC144A-201ENST00000328495 L1CAMP32004 1257 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 CEBPAP49715 358 aaPredicted RBP2.59□□□□□ -2
CCDC144A-201ENST00000328495 LINC00310P59036 64 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 YBX1P67809 324 aaKnown RBP2.59□□□□□ -2
CCDC144A-201ENST00000328495 DPY19L1Q2PZI1 675 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 LARP1BQ659C4 914 aaKnown RBP2.59□□□□□ -2
CCDC144A-201ENST00000328495 SUSD2Q9UGT4 822 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms