RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 A0A1W2PQ27 194 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 A0A1W2PQ64 194 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 A0A1W2PQD8 194 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 RASSF10A6NK89 507 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 M0R2N6 131 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 IGF2BP3O00425 579 aaKnown RBP eCLIP21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 SPTLC2O15270 562 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 ALAS1P13196 640 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 GNA11P29992 359 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 ME1P48163 572 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 OAZ1P54368 228 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 SNRNP48Q6IEG0 339 aaKnown RBP21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 MB21D1Q8N884 522 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 CUL5Q93034 780 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 PAGR1Q9BTK6 254 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 NUP62CLQ9H1M0 184 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 HOMER2Q9NSB8 354 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 DACT1Q9NYF0 836 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 FAM205CA6NFA0 338 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 ATP2A1O14983 1001 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 CNMDO75829 334 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 PLS1Q14651 629 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 SLC39A14Q15043 492 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 SF3A1Q15459 793 aaKnown RBP21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 UBE2SQ16763 222 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 PCDHA6Q9UN73 950 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 MRPL11Q9Y3B7 192 aaKnown RBP21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 RIPK3Q9Y572 518 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 PCDHA8Q9Y5H6 950 aa21.41■■□□□ 1.02
EXOSC3-201ENST00000327304 DEFB115Q30KQ5 88 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 RBSNQ9H1K0 784 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 TXNRD2Q9NNW7 524 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 TMEM260Q9NX78 707 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 RBPJLQ9UBG7 517 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 BIN2Q9UBW5 565 aaPredicted RBP21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 PCDHA7Q9UN72 937 aa21.4■■□□□ 1.02
EXOSC3-201ENST00000327304 PPP6R2O75170 966 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 MRPL12P52815 198 aaKnown RBP21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 RILPL1Q5EBL4 403 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 MUM1L1Q5H9M0 696 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 USP17L6PQ6QN14 398 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 CCAR1Q8IX12 1150 aaKnown RBP21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 REXO1Q8N1G1 1221 aaKnown RBP21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 CLEC4DQ8WXI8 215 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 CLSTN2Q9H4D0 955 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 PNMA2Q9UL42 364 aa21.39■■□□□ 1.02
EXOSC3-201ENST00000327304 NFIBO00712 420 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 STAT3P40763 770 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 JAKMIP3Q5VZ66 844 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 SMCR8Q8TEV9 937 aaPredicted RBP21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 TBC1D5Q92609 795 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 CAPNS2Q96L46 248 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 TRERF1Q96PN7 1200 aa21.39■■□□□ 1.01
EXOSC3-201ENST00000327304 MEIS2O14770 477 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 NR1I2O75469 434 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 CCDC73Q6ZRK6 1079 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 PARK7Q99497 189 aaKnown RBP21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 SPATC1LQ9H0A9 340 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 RNF146Q9NTX7 359 aa21.38■■□□□ 1.01
EXOSC3-201ENST00000327304 AOC2O75106 756 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 CLK2P49760 499 aaKnown RBP21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 HTRA3P83110 453 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 PTPAQ15257 358 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 RBM43Q6ZSC3 357 aaKnown RBP21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 PIK3AP1Q6ZUJ8 805 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 IFNL1Q8IU54 200 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 MRPS27Q92552 414 aaKnown RBP21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 FUCA2Q9BTY2 467 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 GLT8D2Q9H1C3 349 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 TNMDQ9H2S6 317 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 RABGAP1Q9Y3P9 1069 aa21.37■■□□□ 1.01
EXOSC3-201ENST00000327304 CFBP00751 764 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 HOXA13P31271 388 aaPredicted RBP21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 INHBEP58166 350 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 FAM160A1Q05DH4 1040 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 SREBF2Q12772 1141 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 RIOX2Q8IUF8 465 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 ENGASEQ8NFI3 743 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 GTF3C2Q8WUA4 911 aaPredicted RBP21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 PANK2Q9BZ23 570 aa21.36■■□□□ 1.01
EXOSC3-201ENST00000327304 RBBP6Q7Z6E9 1792 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 CCDC194A0A1B0GVG4 234 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 CTAGE5O15320 804 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 NOGQ13253 232 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 Q3C1V9 767 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 TKFCQ3LXA3 575 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 KRT25Q7Z3Z0 450 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 FSIP1Q8NA03 581 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 MOV10L1Q9BXT6 1211 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 GOLPH3LQ9H4A5 285 aa21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 ZCCHC17Q9NP64 241 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 MORC2Q9Y6X9 1032 aaPredicted RBP21.35■■□□□ 1.01
EXOSC3-201ENST00000327304 GCOM1H8Y6P7 765 aaPredicted RBP21.34■■□□□ 1.01
EXOSC3-201ENST00000327304 PIK3CDO00329 1044 aa21.34■■□□□ 1.01
EXOSC3-201ENST00000327304 POLR2MP0CAP2 368 aa21.34■■□□□ 1.01
EXOSC3-201ENST00000327304 TM4SF4P48230 202 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms