RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	MRPS25	P82663	173 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	UTP14C	Q5TAP6	766 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	CEP112	Q8N8E3	955 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	IFIH1	Q9BYX4	1025 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	SMIM23	A6NLE4	172 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771		F5H6K3	240 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	AP5Z1	O43299	807 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	POTEJ	P0CG39	1038 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	STAT3	P40763	770 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	KLRC3	Q07444	240 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	TROAP	Q12815	778 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	IQCB1	Q15051	598 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	MIER3	Q7Z3K6	550 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	RIOK1	Q9BRS2	568 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	TMOD4	Q9NZQ9	345 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	FBXO2	Q9UK22	296 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	BCL9	O00512	1426 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771		E9PMD0	336 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	KRT5	P13647	590 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	GYS1	P13807	737 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	ERCC5	P28715	1186 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	PRCP	P42785	496 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	FMR1	Q06787	632 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	3e-7	■■■□□ 15.5
DDR1-223	ENST00000324771	NFIA	Q12857	509 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	GRIK5	Q16478	980 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	NT5C3A	Q9H0P0	336 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	FLT1	P17948	1338 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	ZBED4	O75132	1171 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	EIF2AK2	P19525	551 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	CTTN	Q14247	550 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	KRT31	Q15323	416 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	LRCH2	Q5VUJ6	765 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	GALNT17	Q6IS24	598 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	DEFB132	Q7Z7B7	95 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	KCNF1	Q9H3M0	494 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	SPTLC3	Q9NUV7	552 aa		13.11	□□□□□ -0.31
DDR1-223	ENST00000324771	ZMYND10	O75800	440 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	RASA1	P20936	1047 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	FAM83B	Q5T0W9	1011 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	RC3H1	Q5TC82	1133 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	FAM178B	Q8IXR5	827 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	NEDD1	Q8NHV4	660 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	BHMT2	Q9H2M3	363 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	ADRA2B	P18089	450 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	DNM2	P50570	870 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	QRICH1	Q2TAL8	776 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	SLC9C1	Q4G0N8	1177 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	VSTM4	Q8IW00	320 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	CCDC94	Q9BW85	323 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	GLT8D2	Q9H1C3	349 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	TMEM60	Q9H2L4	133 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	SWAP70	Q9UH65	585 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	ORC4	O43929	436 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	VEGFA	P15692	232 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	PODN	Q7Z5L7	613 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	KLHL7	Q8IXQ5	586 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	ADGRF4	Q8IZF3	695 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	SLC35F6	Q8N357	371 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	P2RX5	Q93086	422 aa		13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	IRX2	Q9BZI1	471 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-223	ENST00000324771	PNMA6F	A0A0J9YX94	578 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	FCER1A	P12319	257 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	MTF1	Q14872	753 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	XKR9	Q5GH70	373 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ODR4	Q5SWX8	454 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	FAM102B	Q5T8I3	360 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ADAT2	Q7Z6V5	191 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	SECISBP2L	Q93073	1101 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ZNF341	Q9BYN7	854 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ANO3	Q9BYT9	981 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	EPC1	Q9H2F5	836 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	VPS18	Q9P253	973 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	STK36	Q9NRP7	1315 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	CTNNA2	P26232	953 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	NAA15	Q9BXJ9	866 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	PCIF1	Q9H4Z3	704 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	WDR19	Q8NEZ3	1342 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	TLDC2	A0PJX2	215 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	PRPF6	O94906	941 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	NR2F2	P24468	414 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	STAT2	P52630	851 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	CKAP4	Q07065	602 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	9e-7	■■■■□ 24.7
DDR1-223	ENST00000324771	GRM4	Q14833	912 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ASIC2	Q16515	512 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	SYDE2	Q5VT97	1194 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	ARHGEF16	Q5VV41	709 aa		13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	RGPD8	O14715	1765 aa	Predicted RBP	13.09	□□□□□ -0.31
DDR1-223	ENST00000324771	TCRBV5S4A2T	A0A5A2	114 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	POTEB3	A0JP26	581 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	POTEC	B2RU33	542 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	C3	P01024	1663 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	CXCR5	P32302	372 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	KIAA0753	Q2KHM9	967 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	CCDC93	Q567U6	631 aa		13.08	□□□□□ -0.31
DDR1-223	ENST00000324771	POTEB	Q6S5H4	581 aa		13.08	□□□□□ -0.31

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