RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 EEF1GP26641 437 aaKnown RBP22.16■■□□□ 1.14
CRLF3-201ENST00000324238 DNAJC21Q5F1R6 531 aaKnown RBP22.16■■□□□ 1.14
CRLF3-201ENST00000324238 ZNF444Q8N0Y2 327 aaPredicted RBP22.16■■□□□ 1.14
CRLF3-201ENST00000324238 TRIM9Q9C026 710 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 KLRF2D3W0D1 207 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 KRT86O43790 486 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 RHOBTB3O94955 611 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 IPO7O95373 1038 aaKnown RBP22.16■■□□□ 1.14
CRLF3-201ENST00000324238 TMC4Q7Z404 712 aa22.16■■□□□ 1.14
CRLF3-201ENST00000324238 ARPP21Q9UBL0 812 aaPredicted RBP22.16■■□□□ 1.14
CRLF3-201ENST00000324238 F8W031 263 aaPredicted RBP22.15■■□□□ 1.14
CRLF3-201ENST00000324238 MIIPQ5JXC2 388 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 C12orf60Q5U649 245 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 CLEC10AQ8IUN9 316 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 RRP36Q96EU6 259 aaKnown RBP22.15■■□□□ 1.14
CRLF3-201ENST00000324238 CDCA7Q9BWT1 371 aaPredicted RBP22.15■■□□□ 1.14
CRLF3-201ENST00000324238 THAP9Q9H5L6 903 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 CCNL1Q9UK58 526 aaPredicted RBP22.15■■□□□ 1.14
CRLF3-201ENST00000324238 HPCAL4Q9UM19 191 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 M0R2N6 131 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 APBA1Q02410 837 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 TUBB2AQ13885 445 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 LRRC31Q6UY01 552 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 CCDC42Q96M95 316 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 TUBB2BQ9BVA1 445 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 GBP3Q9H0R5 595 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 SEMA6BQ9H3T3 888 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 TCP11L1Q9NUJ3 509 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 DMGDHQ9UI17 866 aaKnown RBP22.15■■□□□ 1.14
CRLF3-201ENST00000324238 NHSL1Q5SYE7 1610 aa22.15■■□□□ 1.14
CRLF3-201ENST00000324238 SLURP2P0DP57 97 aa22.14■■□□□ 1.14
CRLF3-201ENST00000324238 NFRKBQ6P4R8 1299 aa22.14■■□□□ 1.14
CRLF3-201ENST00000324238 KIAA0895Q8NCT3 520 aa22.14■■□□□ 1.14
CRLF3-201ENST00000324238 TTYH3Q9C0H2 523 aa22.14■■□□□ 1.14
CRLF3-201ENST00000324238 FAM170AA1A519 330 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 SMCO2A6NFE2 343 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 CYLC1P35663 651 aaPredicted RBP22.14■■□□□ 1.13
CRLF3-201ENST00000324238 KRT83P78385 493 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 POTEDQ86YR6 584 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 SRLQ86TD4 932 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 FAM71BQ8TC56 605 aa22.14■■□□□ 1.13
CRLF3-201ENST00000324238 FLT1P17948 1338 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 A0A1W2PQC6 194 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 RNASE9P60153 205 aaKnown RBP22.13■■□□□ 1.13
CRLF3-201ENST00000324238 KIF5AQ12840 1032 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 WDR93Q6P2C0 686 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 LRRC1Q9BTT6 524 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 PSD3Q9NYI0 1048 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 BUB1O43683 1085 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 RAD21O60216 631 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 CCNE1P24864 410 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 GRM4Q14833 912 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 PAPD7Q5XG87 772 aaKnown RBP22.13■■□□□ 1.13
CRLF3-201ENST00000324238 PYM1Q9BRP8 204 aaKnown RBP22.13■■□□□ 1.13
CRLF3-201ENST00000324238 SELENOOQ9BVL4 669 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 BARHL2Q9NY43 387 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 ARHGAP20Q9P2F6 1191 aa22.13■■□□□ 1.13
CRLF3-201ENST00000324238 RTCBQ9Y3I0 505 aaKnown RBP22.13■■□□□ 1.13
CRLF3-201ENST00000324238 SECISBP2LQ93073 1101 aaKnown RBP22.12■■□□□ 1.13
CRLF3-201ENST00000324238 NUDT12Q9BQG2 462 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 TBC1D7Q9P0N9 293 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 SALL4Q9UJQ4 1053 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 MYH10P35580 1976 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 FRMPD2Q68DX3 1309 aaPredicted RBP22.12■■□□□ 1.13
CRLF3-201ENST00000324238 OR52Z1P0C646 297 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 EIF4A3P38919 411 aaKnown RBP22.12■■□□□ 1.13
CRLF3-201ENST00000324238 KCNB1Q14721 858 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 RRAGAQ7L523 313 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 TBCKQ8TEA7 893 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 PIGSQ96S52 555 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 MMTAG2Q9BU76 263 aaKnown RBP22.12■■□□□ 1.13
CRLF3-201ENST00000324238 DEF6Q9H4E7 631 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 CWC15Q9P013 229 aaKnown RBP22.12■■□□□ 1.13
CRLF3-201ENST00000324238 NARFQ9UHQ1 456 aa22.12■■□□□ 1.13
CRLF3-201ENST00000324238 POTEMA6NI47 508 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
CRLF3-201ENST00000324238 TM4SF1P30408 202 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 RFC4P35249 363 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 NAP1L1P55209 391 aaKnown RBP22.11■■□□□ 1.13
CRLF3-201ENST00000324238 ZBED6P86452 979 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 PICALMQ13492 652 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 MEA1Q16626 185 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 IFIH1Q9BYX4 1025 aaKnown RBP22.11■■□□□ 1.13
CRLF3-201ENST00000324238 SPA17Q15506 151 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 PTPROQ16827 1216 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 SND1Q7KZF4 910 aaKnown RBP eCLIP22.11■■□□□ 1.13
CRLF3-201ENST00000324238 COA7Q96BR5 231 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 CRACR2AQ9BSW2 395 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 CCSER1Q9C0I3 900 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 NLRC4Q9NPP4 1024 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 DGKHQ86XP1 1220 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 MS4A14Q96JA4 679 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 TANGO6Q9C0B7 1094 aa22.11■■□□□ 1.13
CRLF3-201ENST00000324238 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
CRLF3-201ENST00000324238 AKR1B10O60218 316 aa22.1■■□□□ 1.13
CRLF3-201ENST00000324238 ARID5AQ03989 594 aa22.1■■□□□ 1.13
CRLF3-201ENST00000324238 AFAP1L1Q8TED9 768 aa22.1■■□□□ 1.13
CRLF3-201ENST00000324238 ANKRD2Q9GZV1 360 aa22.1■■□□□ 1.13
CRLF3-201ENST00000324238 AGPSO00116 658 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms