RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 CYTH3O43739 400 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 COL6A1P12109 1028 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 RXRAP19793 462 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
TUBA3D-201ENST00000321253 SLC35G1Q2M3R5 365 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 BLOC1S2Q6QNY1 142 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 MICU3Q86XE3 530 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 DNERQ8NFT8 737 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
TUBA3D-201ENST00000321253 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
TUBA3D-201ENST00000321253 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 SENP6Q9GZR1 1112 aaPredicted RBP17■□□□□ 0.31
TUBA3D-201ENST00000321253 BAZ2BQ9UIF8 2168 aaKnown RBP16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 PGK1P00558 417 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 PSMA5P28066 241 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 LRRC41Q15345 812 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 EEPD1Q7L9B9 569 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 RAB11FIP4Q86YS3 637 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 KATNBL1Q9H079 304 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 SPC25Q9HBM1 224 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 VTA1Q9NP79 307 aa16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
TUBA3D-201ENST00000321253 DUSP11O75319 330 aaKnown RBP16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 CFBP00751 764 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 PDE4DQ08499 809 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 NOL8Q76FK4 1167 aaKnown RBP16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 FANCBQ8NB91 859 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 MORC4Q8TE76 937 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
TUBA3D-201ENST00000321253 ZBTB43O43298 467 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 PLEKHA8P1O95397 391 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 CPA1P15085 419 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 TNFAIP2Q03169 654 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 SYTL5Q8TDW5 730 aaPredicted RBP16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 LRRC37A2A6NM11 1700 aa16.97■□□□□ 0.31
TUBA3D-201ENST00000321253 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 H0YGN5 161 aa16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 ADCYAP1R1P41586 468 aa16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 NSUN6Q8TEA1 469 aaKnown RBP16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 RBM28Q9NW13 759 aaKnown RBP16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 CEP290O15078 2479 aa16.96■□□□□ 0.31
TUBA3D-201ENST00000321253 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 ADAMTS4O75173 837 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 RPS6KB1P23443 525 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 RTN1Q16799 776 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 IQSEC1Q6DN90 963 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 Q6ZUG5 572 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 RMDN3Q96TC7 470 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.3
TUBA3D-201ENST00000321253 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 GOLGA8AA7E2F4 631 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 GOLGA8BA8MQT2 603 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 OPLAHO14841 1288 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 ADCY6O43306 1168 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 EDNRBP24530 442 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 HSD17B4P51659 736 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 ARHGEF16Q5VV41 709 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 TAPT1Q6NXT6 567 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 CCDC82Q8N4S0 544 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 TAAR1Q96RJ0 339 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 AP5M1Q9H0R1 490 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 PHF24Q9UPV7 400 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 ALPK3Q96L96 1907 aa16.95■□□□□ 0.3
TUBA3D-201ENST00000321253 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 RCAN1P53805 252 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 GJA9P57773 515 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 GHRHRQ02643 423 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 TLK2Q86UE8 772 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 BRF1Q92994 677 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 IWS1Q96ST2 819 aa16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
TUBA3D-201ENST00000321253 SMPD1P17405 629 aa16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 CST5P28325 142 aaPredicted RBP16.93■□□□□ 0.3
TUBA3D-201ENST00000321253 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms