RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NFIAQ12857 509 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 PAK1Q13153 545 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 KRT31Q15323 416 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 CCDC96Q2M329 555 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 KCTD1Q719H9 257 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 NEDD1Q8NHV4 660 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 AKR1B15C9JRZ8 316 aaPredicted RBP17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 RGL2O15211 777 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 KIF5CO60282 957 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 FILIP1LQ4L180 1135 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 NAALADL2Q58DX5 795 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 ACRBPQ8NEB7 543 aa17.38■□□□□ 0.37
SHROOM1-201ENST00000319854 A0A1B0GTH6 734 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 ADRA2BP18089 450 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 PLCG1P19174 1290 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 TNNI2P48788 182 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 UBE2SQ16763 222 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 HSP90B2PQ58FF3 399 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 NCAPGQ9BPX3 1015 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 RNF40O75150 1001 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 LONP1P36776 959 aaKnown RBP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 NCAPH2Q6IBW4 605 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 ELOA2Q8IYF1 753 aaPredicted RBP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
SHROOM1-201ENST00000319854 PLCG2P16885 1265 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 NONOQ15233 471 aaKnown RBP eCLIP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 APTXQ7Z2E3 356 aaKnown RBP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 CERKQ8TCT0 537 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 C6orf50Q9HD87 102 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 MYO1BO43795 1136 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 MMP10P09238 476 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 GDAP1L1Q96MZ0 367 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 TCP11L1Q9NUJ3 509 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 POTEB2H3BUK9 544 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 RNF225M0QZC1 329 aaPredicted RBP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 PPFIA4O75335 1185 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 SNAP25P60880 206 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 CABP7Q86V35 215 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 REXO1Q8N1G1 1221 aaKnown RBP17.36■□□□□ 0.37
SHROOM1-201ENST00000319854 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 CTAGE9A4FU28 777 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 PDHBP11177 359 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 UBXN1Q04323 297 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 KAT2BQ92831 832 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 TRIM47Q96LD4 638 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 KCNJ18B7U540 433 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 PRPF6O94906 941 aaKnown RBP17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 TDP2O95551 362 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 ASIC1P78348 528 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 KCNJ12Q14500 433 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 ARL6IP4Q66PJ3 421 aaKnown RBP17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 DYMQ7RTS9 669 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 COL23A1Q86Y22 540 aaPredicted RBP17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 MICALL1Q8N3F8 863 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 TBC1D22AQ8WUA7 517 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 PANX2Q96RD6 677 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 SH3GLB2Q9NR46 395 aa17.35■□□□□ 0.37
SHROOM1-201ENST00000319854 M0R2N6 131 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 ANKS1AQ92625 1134 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 MTMR4Q9NYA4 1195 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CTAGE15A4D2H0 777 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 MARCH6O60337 910 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CTAGE8P0CG41 777 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CHRM1P11229 460 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 FCER1AP12319 257 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 ZNF658Q5TYW1 1059 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CDKAL1Q5VV42 579 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 NEK8Q86SG6 692 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CTAGE6Q86UF2 777 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 CTAGE4Q8IX94 777 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 MYCBPQ99417 103 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 POTEMA6NI47 508 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 APBA3O96018 575 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 TADA2BQ86TJ2 420 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 TMX4Q9H1E5 349 aaPredicted RBP17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 RABEP2Q9H5N1 569 aa17.34■□□□□ 0.37
SHROOM1-201ENST00000319854 GYPCP04921 128 aa17.33■□□□□ 0.37
SHROOM1-201ENST00000319854 TAL1P17542 331 aaPredicted RBP17.33■□□□□ 0.37
SHROOM1-201ENST00000319854 GNA11P29992 359 aa17.33■□□□□ 0.37
SHROOM1-201ENST00000319854 EHD4Q9H223 541 aa17.33■□□□□ 0.37
SHROOM1-201ENST00000319854 DEF6Q9H4E7 631 aa17.33■□□□□ 0.37
SHROOM1-201ENST00000319854 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
SHROOM1-201ENST00000319854 PDE4DQ08499 809 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms