RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 SWT1Q5T5J6 900 aaKnown RBP21.67■■□□□ 1.06
ZNF554-201ENST00000317243 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
ZNF554-201ENST00000317243 DDX4Q9NQI0 724 aaKnown RBP21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TAB2Q9NYJ8 693 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TTF2Q9UNY4 1162 aaKnown RBP21.67■■□□□ 1.06
ZNF554-201ENST00000317243 GPR75-ASB3A0A0A6YYF3 556 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 CCDC194A0A1B0GVG4 234 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TUBB4BP68371 445 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TUBB2AQ13885 445 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 KRT31Q15323 416 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 SHROOM1Q2M3G4 852 aaPredicted RBP21.67■■□□□ 1.06
ZNF554-201ENST00000317243 RRAGBQ5VZM2 374 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 FBXW10Q5XX13 1052 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 CERS5Q8N5B7 392 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TUBB2BQ9BVA1 445 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TMEM260Q9NX78 707 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 TRIM10Q9UDY6 481 aa21.67■■□□□ 1.06
ZNF554-201ENST00000317243 PALM3A6NDB9 673 aaPredicted RBP21.66■■□□□ 1.06
ZNF554-201ENST00000317243 POLRMTO00411 1230 aaKnown RBP21.66■■□□□ 1.06
ZNF554-201ENST00000317243 MNAT1P51948 309 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 GSTO1P78417 241 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 NAALADL2Q58DX5 795 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 CT47A1Q5JQC4 288 aaPredicted RBP21.66■■□□□ 1.06
ZNF554-201ENST00000317243 PIGSQ96S52 555 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 ABHD10Q9NUJ1 306 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 GUCA1BQ9UMX6 200 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 ENC1O14682 589 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 ZMYND10O75800 440 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 IL1R1P14778 569 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 EHD4Q9H223 541 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 CXorf56Q9H5V9 222 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 HPCAL4Q9UM19 191 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 DAGLAQ9Y4D2 1042 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
ZNF554-201ENST00000317243 AARSP49588 968 aaKnown RBP eCLIP21.65■■□□□ 1.06
ZNF554-201ENST00000317243 WDR93Q6P2C0 686 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 CERKQ8TCT0 537 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 RBM17Q96I25 401 aaKnown RBP21.65■■□□□ 1.06
ZNF554-201ENST00000317243 MYO6Q9UM54 1294 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 PES1O00541 588 aaKnown RBP21.65■■□□□ 1.06
ZNF554-201ENST00000317243 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 AMOTL1Q8IY63 956 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 GSDMAQ96QA5 445 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 CEP89Q96ST8 783 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 BARHL2Q9NY43 387 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 TFR2Q9UP52 801 aa21.65■■□□□ 1.06
ZNF554-201ENST00000317243 KRT9P35527 623 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 GGCXP38435 758 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 PMS1P54277 932 aaKnown RBP21.64■■□□□ 1.06
ZNF554-201ENST00000317243 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 TMTC1Q8IUR5 882 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 CCDC148Q8NFR7 591 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 RASSF8Q8NHQ8 419 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 CHP1Q99653 195 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 BIN2Q9UBW5 565 aaPredicted RBP21.64■■□□□ 1.06
ZNF554-201ENST00000317243 MYH1P12882 1939 aa21.64■■□□□ 1.06
ZNF554-201ENST00000317243 ATP2B4P23634 1241 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 NAPAP54920 295 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 QTRT2Q9H974 415 aaKnown RBP21.64■■□□□ 1.05
ZNF554-201ENST00000317243 FAM169AQ9Y6X4 670 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 FAM196BA6NMK8 535 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 HNRNPH1P31943 449 aaKnown RBP21.64■■□□□ 1.05
ZNF554-201ENST00000317243 ARHGAP25P42331 645 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 CACNB3P54284 484 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 GSPT2Q8IYD1 628 aaKnown RBP21.64■■□□□ 1.05
ZNF554-201ENST00000317243 ANKS1AQ92625 1134 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 COA7Q96BR5 231 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 HDAC6Q9UBN7 1215 aa21.64■■□□□ 1.05
ZNF554-201ENST00000317243 TUBBP07437 444 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 LDHCP07864 332 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 STAT6P42226 847 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 GSCP56915 257 aaPredicted RBP21.63■■□□□ 1.05
ZNF554-201ENST00000317243 MSL1Q68DK7 614 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 CYP26C1Q6V0L0 522 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 VIPAS39Q9H9C1 493 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
ZNF554-201ENST00000317243 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 AKR1B1P15121 316 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 CALML3P27482 149 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 PRCPP42785 496 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 STIM1Q13586 685 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 HPS3Q969F9 1004 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 GJA10Q969M2 543 aa21.63■■□□□ 1.05
ZNF554-201ENST00000317243 KCNV1Q6PIU1 500 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 ZC3H4Q9UPT8 1303 aaKnown RBP21.62■■□□□ 1.05
ZNF554-201ENST00000317243 NKRFO15226 690 aaKnown RBP eCLIP21.62■■□□□ 1.05
ZNF554-201ENST00000317243 CCNT1O60563 726 aaKnown RBP21.62■■□□□ 1.05
ZNF554-201ENST00000317243 BMP15O95972 392 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 MAP2K2P36507 400 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 AMPD2Q01433 879 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 EP400NLQ6ZTU2 488 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 ANKRD20A12PQ8NF67 263 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 CCDC51Q96ER9 411 aa21.62■■□□□ 1.05
ZNF554-201ENST00000317243 SMCO2A6NFE2 343 aa21.61■■□□□ 1.05
ZNF554-201ENST00000317243 EBAG9O00559 213 aa21.61■■□□□ 1.05
ZNF554-201ENST00000317243 RPN1P04843 607 aaKnown RBP21.61■■□□□ 1.05
ZNF554-201ENST00000317243 PARP1P09874 1014 aaKnown RBP21.61■■□□□ 1.05
ZNF554-201ENST00000317243 IRAK1P51617 712 aa21.61■■□□□ 1.05
ZNF554-201ENST00000317243 COPB1P53618 953 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms