RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 CTDP1Q9Y5B0 961 aaPredicted RBP16.1■□□□□ 0.17
MSRA-201ENST00000317173 PCDHA8Q9Y5H6 950 aa16.1■□□□□ 0.17
MSRA-201ENST00000317173 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 VWA5AO00534 786 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
MSRA-201ENST00000317173 SAMD3Q8N6K7 520 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 ATP2A1O14983 1001 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 FIBPO43427 364 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 GNRH1P01148 92 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
MSRA-201ENST00000317173 LACTBP83111 547 aaPredicted RBP16.09■□□□□ 0.17
MSRA-201ENST00000317173 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 CCDC174Q6PII3 467 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 MAF1Q9H063 256 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
MSRA-201ENST00000317173 MORC2Q9Y6X9 1032 aaPredicted RBP16.09■□□□□ 0.17
MSRA-201ENST00000317173 ZNF536O15090 1300 aa16.08■□□□□ 0.17
MSRA-201ENST00000317173 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 BMP15O95972 392 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 CYP2C8P10632 490 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 SNAP25P60880 206 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 AP3B2Q13367 1082 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
MSRA-201ENST00000317173 USH1GQ495M9 461 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
MSRA-201ENST00000317173 LEO1Q8WVC0 666 aaPredicted RBP16.08■□□□□ 0.16
MSRA-201ENST00000317173 ATG4CQ96DT6 458 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 LMBRD1Q9NUN5 540 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.16
MSRA-201ENST00000317173 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.16
MSRA-201ENST00000317173 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
MSRA-201ENST00000317173 FOSP01100 380 aaPredicted RBP16.07■□□□□ 0.16
MSRA-201ENST00000317173 OSBPP22059 807 aa16.07■□□□□ 0.16
MSRA-201ENST00000317173 TOB1P50616 345 aaPredicted RBP16.07■□□□□ 0.16
MSRA-201ENST00000317173 TREML2Q5T2D2 321 aa16.07■□□□□ 0.16
MSRA-201ENST00000317173 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
MSRA-201ENST00000317173 REPS2Q8NFH8 660 aa16.07■□□□□ 0.16
MSRA-201ENST00000317173 MAP3K20Q9NYL2 800 aaKnown RBP16.07■□□□□ 0.16
MSRA-201ENST00000317173 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 BCRP11274 1271 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 PRMT2P55345 433 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 GHRHRQ02643 423 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 ORC2Q13416 577 aaPredicted RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
MSRA-201ENST00000317173 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
MSRA-201ENST00000317173 MEIS2O14770 477 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 PPP6R2O75170 966 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 UBE2HP62256 183 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 STK38Q15208 465 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
MSRA-201ENST00000317173 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 TEX13BQ9BXU2 312 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
MSRA-201ENST00000317173 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
MSRA-201ENST00000317173 ZNF214Q9UL59 606 aaPredicted RBP16.05■□□□□ 0.16
MSRA-201ENST00000317173 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
MSRA-201ENST00000317173 OPLAHO14841 1288 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 ADAMTS3O15072 1205 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 MBD3O95983 291 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 HOXD10P28358 340 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 NEK8Q86SG6 692 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 RAVER2Q9HCJ3 691 aaKnown RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 GCOM1H8Y6P7 765 aaPredicted RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 SPTLC2O15270 562 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 POLR2MP0CAP2 368 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 PSMC4P43686 418 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 FCGRTP55899 365 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 CAP1Q01518 475 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
MSRA-201ENST00000317173 PTPAQ15257 358 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 FTOQ9C0B1 505 aaKnown RBP eCLIP16.04■□□□□ 0.16
MSRA-201ENST00000317173 ARHGAP39Q9C0H5 1083 aa16.04■□□□□ 0.16
MSRA-201ENST00000317173 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms