RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ZBED6P86452 979 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ARL6IP4Q66PJ3 421 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IL17RAQ96F46 866 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SELENOSQ9BQE4 189 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 N4BP2Q86UW6 1770 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ZCCHC11Q5TAX3 1644 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 KNDC1Q76NI1 1749 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC160A6NGH7 325 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 MAPK13O15264 365 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 GTPBP6O43824 516 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 AHCYL1O43865 530 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 GFPT2O94808 682 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SLC5A1P13866 664 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 DDR1Q08345 913 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IFT88Q13099 833 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 HAUS3Q68CZ6 603 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ANKLE2Q86XL3 938 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IWS1Q96ST2 819 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 METTL14Q9HCE5 456 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 GPR108Q9NPR9 543 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PI4KAP42356 2102 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 TNKSO95271 1327 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 WDR17Q8IZU2 1322 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 LMTK2Q8IWU2 1503 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 A0A087WWV3 80 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PNMA6EA0A0J9YXQ4 647 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 GMNCA6NCL1 334 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SFMBT2Q5VUG0 894 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PROM2Q8N271 834 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 NEK9Q8TD19 979 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 FGD4Q96M96 766 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SERPINI1Q99574 410 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ANK1P16157 1881 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 KLF18A0A0U1RQI7 1052 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 MIF4GDA9UHW6 222 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IFIT3O14879 490 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SLC27A2O14975 620 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CHMP2AO43633 222 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CTNNA2P26232 953 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 TUBA4AP68366 448 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 TBC1D8BQ0IIM8 1120 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CDC37L1Q7L3B6 337 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 DZIP3Q86Y13 1208 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 TRAPPC9Q96Q05 1148 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PARVBQ9HBI1 364 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PAG1Q9NWQ8 432 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 KDRP35968 1356 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IQCA1LA6NCM1 817 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SMAPO00193 183 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 EPB41P11171 864 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 BCRP11274 1271 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 IBSPP21815 317 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 LONP1P36776 959 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 GSTO1P78417 241 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 UBE4AQ14139 1066 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 DAB2IPQ5VWQ8 1189 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 APBB2Q92870 758 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 BICC1Q9H694 974 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PLCE1Q9P212 2302 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ADGRB3O60242 1522 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 AREL1O15033 823 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PRLRP16471 622 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 SERPINB10P48595 397 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 FKBP4Q02790 459 aaKnown RBP eCLIP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 BICD1Q96G01 975 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 THAP9Q9H5L6 903 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 AMOTL2Q9Y2J4 779 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ATP6V0A2Q9Y487 856 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 MYL6BP14649 208 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 BYSLQ13895 437 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CYLC2Q14093 348 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 NME9Q86XW9 330 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 NOSTRINQ8IVI9 506 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KCTD17Q8N5Z5 321 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CUL5Q93034 780 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PFDN4Q9NQP4 134 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 INTS9Q9NV88 658 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 YTHDC2Q9H6S0 1430 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CALUO43852 315 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KRT13P13646 458 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 ATP5JP18859 108 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 TNFRSF8P28908 595 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CDK17Q00537 523 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KCNJ12Q14500 433 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 DTHD1Q6ZMT9 781 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PEX26Q7Z412 305 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 RIBC1Q8N443 379 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 KLHL29Q96CT2 875 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CDC5LQ99459 802 aaKnown RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 SIKE1Q9BRV8 207 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC8Q9H0W5 538 aaPredicted RBP4.92□□□□□ -1.62
CNOT1-201ENST00000317147 ETAA1Q9NY74 926 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 AMFRQ9UKV5 643 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 ZFYVE16Q7Z3T8 1539 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 PSMD14O00487 310 aa4.92□□□□□ -1.62
CNOT1-201ENST00000317147 CTNND1O60716 968 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms