RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CCDC178Q5BJE1 867 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 CCDC148Q8NFR7 591 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 IDI2Q9BXS1 227 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 DHX36Q9H2U1 1008 aaKnown RBP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 RIOX1Q9H6W3 641 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 PSTPIP2Q9H939 334 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 KANSL2Q9H9L4 492 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 SWAP70Q9UH65 585 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 TUBE1Q9UJT0 475 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 ZNRF3Q9ULT6 936 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 GDAQ9Y2T3 454 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 MYH15Q9Y2K3 1946 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 NEMFO60524 1076 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 HMGB2P26583 209 aaKnown RBP8.57□□□□□ -1.04
TRIM55-202ENST00000315962 GNA11P29992 359 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 ADCY7P51828 1080 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 DPYDQ12882 1025 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 TMEM51Q9NW97 253 aa8.57□□□□□ -1.04
TRIM55-202ENST00000315962 EDIL3O43854 480 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 SASH3O75995 380 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 POLD1P28340 1107 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 PRELPP51888 382 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 GNG11P61952 73 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 SKIDA1Q1XH10 827 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 FAM83BQ5T0W9 1011 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 TOGARAM2Q6ZUX3 1019 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 NEK8Q86SG6 692 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 CYP2W1Q8TAV3 490 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 IPO4Q8TEX9 1081 aaKnown RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 FERMT2Q96AC1 680 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 P2RX7Q99572 595 aaKnown RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 PNMA6FA0A0J9YX94 578 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 NFKBIEO00221 500 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 ZBTB5O15062 677 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 HNRNPH2P55795 449 aaKnown RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 GSDMDP57764 484 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 MYL5Q02045 173 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 SYCP1Q15431 976 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 ASPRV1Q53RT3 343 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 RRAGBQ5VZM2 374 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 DYMQ7RTS9 669 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 IQUBQ8NA54 791 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 ZNF579Q8NAF0 562 aaKnown RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 SUPT20HQ8NEM7 779 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 HOMER2Q9NSB8 354 aa8.56□□□□□ -1.04
TRIM55-202ENST00000315962 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
TRIM55-202ENST00000315962 TRIM49BA6NDI0 452 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 SSBP05455 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 H2AFXP16104 143 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 ETF1P62495 437 aaKnown RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 CACNB1Q02641 598 aaPredicted RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 RASA3Q14644 834 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 GPIHBP1Q8IV16 184 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 LZTFL1Q9NQ48 299 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 SH3GLB2Q9NR46 395 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 PUF60Q9UHX1 559 aaKnown RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 HDAC9Q9UKV0 1011 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 PES1O00541 588 aaKnown RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 SNHG28P0DPA3 235 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 PLCG1P19174 1290 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 CCT6AP40227 531 aaKnown RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 STAT3P40763 770 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 TATDN1Q6P1N9 297 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 TRIM65Q6PJ69 517 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 CPXCR1Q8N123 301 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 LZTS2Q9BRK4 669 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 INTS13Q9NVM9 706 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
TRIM55-202ENST00000315962 CTNND2Q9UQB3 1225 aa8.55□□□□□ -1.04
TRIM55-202ENST00000315962 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 FAM237AA0A1B0GTK4 181 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CFBP00751 764 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 E2F4Q16254 413 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 TMEM179Q6ZVK1 233 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CCDC150Q8NCX0 1101 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CCDC17Q96LX7 622 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 GMLQ99445 158 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 SUGCTQ9HAC7 445 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CAVIN2O95810 425 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 CAPN2P17655 700 aa8.54□□□□□ -1.04
TRIM55-202ENST00000315962 OAS2P29728 719 aaKnown RBP8.54□□□□□ -1.04
TRIM55-202ENST00000315962 SARSP49591 514 aaKnown RBP8.54□□□□□ -1.04
TRIM55-202ENST00000315962 MORC3Q14149 939 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms