RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 RETREG2Q8NC44 543 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 GIMAP8Q8ND71 665 aaPredicted RBP16.72■□□□□ 0.27
CHFR-202ENST00000315585 KIFC2Q96AC6 838 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 FAM53CQ9NYF3 392 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 DNM2P50570 870 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 TGFB2P61812 414 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 CABP7Q86V35 215 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 WDR24Q96S15 920 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 VPS16Q9H269 839 aa16.72■□□□□ 0.27
CHFR-202ENST00000315585 KIF20AO95235 890 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 POLD1P28340 1107 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 TYW1BQ6NUM6 668 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
CHFR-202ENST00000315585 MTMR4Q9NYA4 1195 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 CTAGE9A4FU28 777 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 CCNT1O60563 726 aaKnown RBP16.71■□□□□ 0.27
CHFR-202ENST00000315585 TUBBP07437 444 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 DPEP1P16444 411 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 CLCN6P51797 869 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 RAD9BQ6WBX8 426 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 OR8K1Q8NGG5 319 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
CHFR-202ENST00000315585 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 TTLL1O95922 423 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 KRT9P35527 623 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
CHFR-202ENST00000315585 C7orf25Q9BPX7 421 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 LZTFL1Q9NQ48 299 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 EXOC1Q9NV70 894 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 LUC7L2Q9Y383 392 aaKnown RBP16.7■□□□□ 0.26
CHFR-202ENST00000315585 MYH8P13535 1937 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHFR-202ENST00000315585 LETM2Q2VYF4 491 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 SCN9AQ15858 1988 aa16.7■□□□□ 0.26
CHFR-202ENST00000315585 IGKV6D-41A0A0C4DH26 115 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 ENTPD3O75355 529 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
CHFR-202ENST00000315585 CDC25AP30304 524 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 MRPL44Q9H9J2 332 aaKnown RBP16.69■□□□□ 0.26
CHFR-202ENST00000315585 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
CHFR-202ENST00000315585 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 CDC23Q9UJX2 597 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
CHFR-202ENST00000315585 KIF13BQ9NQT8 1826 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 AKR1B1P15121 316 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 NFIAQ12857 509 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 RSRC2Q7L4I2 434 aaKnown RBP16.69■□□□□ 0.26
CHFR-202ENST00000315585 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 STK17AQ9UEE5 414 aa16.69■□□□□ 0.26
CHFR-202ENST00000315585 KCNA3P22001 575 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 CCNE1P24864 410 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 SHMT1P34896 483 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 KRT83P78385 493 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 MTF1Q14872 753 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 KIF4BQ2VIQ3 1234 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 PPP1R18Q6NYC8 613 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 RSBN1LQ6PCB5 846 aaPredicted RBP16.68■□□□□ 0.26
CHFR-202ENST00000315585 SRGAP1Q7Z6B7 1085 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
CHFR-202ENST00000315585 EHBP1Q8NDI1 1231 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 PRDM10Q9NQV6 1147 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 ADAMTSL1Q8N6G6 1762 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 KLRC4O43908 158 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 IPO7O95373 1038 aaKnown RBP16.68■□□□□ 0.26
CHFR-202ENST00000315585 GOLGA8HP0CJ92 632 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 NAP1L4Q99733 375 aaKnown RBP16.68■□□□□ 0.26
CHFR-202ENST00000315585 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 CAPN11Q9UMQ6 739 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 PSME4Q14997 1843 aa16.68■□□□□ 0.26
CHFR-202ENST00000315585 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
CHFR-202ENST00000315585 YDJCA8MPS7 323 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 FANCGO15287 622 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 PLCG1P19174 1290 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 CHMP4BP1P59074 171 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 PDE4DQ08499 809 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
CHFR-202ENST00000315585 P2RX5Q93086 422 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms