RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 SDSP20132 328 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 SLC16A2P36021 539 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
TPM3-203ENST00000312970 SMAD3P84022 425 aaKnown RBP9.59□□□□□ -0.87
TPM3-203ENST00000312970 FPGSQ05932 587 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 CCDC96Q2M329 555 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 MUM1L1Q5H9M0 696 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 AKNAD1Q5T1N1 836 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 IQSEC1Q6DN90 963 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 TTBK2Q6IQ55 1244 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 ZNF589Q86UQ0 364 aaPredicted RBP9.59□□□□□ -0.87
TPM3-203ENST00000312970 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 RANBP17Q9H2T7 1088 aaKnown RBP9.59□□□□□ -0.87
TPM3-203ENST00000312970 CYP39A1Q9NYL5 469 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 ZMYM6O95789 1325 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 ZNF213O14771 459 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 CTAGE5O15320 804 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 DYNC1LI2O43237 492 aaPredicted RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 ZEB2O60315 1214 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 CABYRO75952 493 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 EPHB4P54760 987 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 HAND2P61296 217 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 NUCB1Q02818 461 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 SYDE2Q5VT97 1194 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 MFSD5Q6N075 450 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 NSMFQ6X4W1 530 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 RASGRP2Q7LDG7 609 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 YTHDC1Q96MU7 727 aaKnown RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 RNF41Q9H4P4 317 aaPredicted RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 ADD3Q9UEY8 706 aaKnown RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 PNMA2Q9UL42 364 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
TPM3-203ENST00000312970 Q9Y3F1 56 aa9.58□□□□□ -0.88
TPM3-203ENST00000312970 MCM3APO60318 1980 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.57□□□□□ -0.88
TPM3-203ENST00000312970 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.57□□□□□ -0.88
TPM3-203ENST00000312970 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 IGHDP01880 384 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 PDHBP11177 359 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 SMPD1P17405 629 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 BEX3Q00994 111 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 BAATQ14032 418 aaPredicted RBP9.57□□□□□ -0.88
TPM3-203ENST00000312970 FSCN1Q16658 493 aaKnown RBP9.57□□□□□ -0.88
TPM3-203ENST00000312970 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 TAPT1Q6NXT6 567 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 KIAA1211Q6ZU35 1233 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 EEPD1Q7L9B9 569 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 ESR2Q92731 530 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
TPM3-203ENST00000312970 SEZ6LQ9BYH1 1024 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 VTA1Q9NP79 307 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 PDGFCQ9NRA1 345 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 TBX21Q9UL17 535 aa9.57□□□□□ -0.88
TPM3-203ENST00000312970 ASTN1O14525 1302 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 FRMPD2Q68DX3 1309 aaPredicted RBP9.56□□□□□ -0.88
TPM3-203ENST00000312970 LOC102724159A0A0B4J2E5 919 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 PTPDC1A2A3K4 754 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 HIP1O00291 1037 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 NT5C2P49902 561 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 ZNF543Q08ER8 600 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 PPIGQ13427 754 aaKnown RBP eCLIP9.56□□□□□ -0.884e-7■□□□□ 9.5
TPM3-203ENST00000312970 ITGA7Q13683 1181 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 PWP2Q15269 919 aaKnown RBP9.56□□□□□ -0.88
TPM3-203ENST00000312970 CWC27Q6UX04 472 aaKnown RBP9.56□□□□□ -0.88
TPM3-203ENST00000312970 CXCL17Q6UXB2 119 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 TLK2Q86UE8 772 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 FAM126BQ8IXS8 530 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 TMEM199Q8N511 208 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 USP38Q8NB14 1042 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 SLC43A3Q8NBI5 491 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 EXOC6Q8TAG9 804 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
TPM3-203ENST00000312970 DIAPH3Q9NSV4 1193 aa9.56□□□□□ -0.88
TPM3-203ENST00000312970 DDX49Q9Y6V7 483 aaKnown RBP9.56□□□□□ -0.88
TPM3-203ENST00000312970 CHD7Q9P2D1 2997 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 NFIBO00712 420 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 CD4P01730 458 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 SNHG28P0DPA3 235 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 FOSL2P15408 326 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 CALML3P27482 149 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 ALDH5A1P51649 535 aaPredicted RBP9.55□□□□□ -0.88
TPM3-203ENST00000312970 DUSP28Q4G0W2 176 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 GPATCH4Q5T3I0 446 aaKnown RBP9.55□□□□□ -0.88
TPM3-203ENST00000312970 RNF207Q6ZRF8 634 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 C16orf59Q7L2K0 433 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 IQCA1Q86XH1 822 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 TBC1D10CQ8IV04 446 aa9.55□□□□□ -0.88
TPM3-203ENST00000312970 FBXO16Q8IX29 292 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms