RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 GJB4Q9NTQ9 266 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 MRPL11Q9Y3B7 192 aaKnown RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 ZNF236Q9UL36 1845 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 PLXNA1Q9UIW2 1896 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 STXBP3O00186 592 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 IGHA2P01877 340 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 XRCC5P13010 732 aaKnown RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 SCG2P13521 617 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 FDPSP14324 419 aaKnown RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 PRMT2P55345 433 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 PFKFB3Q16875 520 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 USP17L6PQ6QN14 398 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 SYTL5Q8TDW5 730 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
PDE4D-201ENST00000309641 RNF26Q9BY78 433 aaPredicted RBP10.5□□□□□ -0.73
PDE4D-201ENST00000309641 MCM3APO60318 1980 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 MTFR1Q15390 333 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 PKN2Q16513 984 aaKnown RBP10.49□□□□□ -0.73
PDE4D-201ENST00000309641 UBE2SQ16763 222 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 SLC9C1Q4G0N8 1177 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 PRAMEF19Q5SWL8 479 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 NSUN7Q8NE18 718 aaKnown RBP10.49□□□□□ -0.73
PDE4D-201ENST00000309641 TAAR1Q96RJ0 339 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 BARHL2Q9NY43 387 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
PDE4D-201ENST00000309641 MEIS2O14770 477 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 INHAP05111 366 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 HSD17B4P51659 736 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 SSRP1Q08945 709 aaKnown RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 PNMA2Q9UL42 364 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 PFASO15067 1338 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 SNAI1O95863 264 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 NAPAP54920 295 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 UBXN2AP68543 259 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 RGS22Q8NE09 1264 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
PDE4D-201ENST00000309641 ORC3Q9UBD5 711 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 BIN2Q9UBW5 565 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-201ENST00000309641 DEXIO95424 95 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 FOSBP53539 338 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 GHRHRQ02643 423 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 CPLX2Q6PUV4 134 aaKnown RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 MCF2L2Q86YR7 1114 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 SLAIN1Q8ND83 568 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 ZNF333Q96JL9 665 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 PSTPIP2Q9H939 334 aa10.47□□□□□ -0.73
PDE4D-201ENST00000309641 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 DIS3Q9Y2L1 958 aaKnown RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 KIAA0100Q14667 2235 aaKnown RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 RBBP6Q7Z6E9 1792 aaKnown RBP10.47□□□□□ -0.73
PDE4D-201ENST00000309641 SMCO2A6NFE2 343 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 GCOM1H8Y6P7 765 aaPredicted RBP10.46□□□□□ -0.73
PDE4D-201ENST00000309641 HMGCRP04035 888 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 POLR2MP0CAP2 368 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
PDE4D-201ENST00000309641 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
PDE4D-201ENST00000309641 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.73
PDE4D-201ENST00000309641 MAP3K21Q5TCX8 1036 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 OLFML2BQ68BL8 750 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 EEPD1Q7L9B9 569 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 IL31RAQ8NI17 732 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 ARMC5Q96C12 935 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 PGBD1Q96JS3 809 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 TMEM260Q9NX78 707 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.73
PDE4D-201ENST00000309641 CDKL5O76039 1030 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 EIF2AK2P19525 551 aaKnown RBP10.46□□□□□ -0.74
PDE4D-201ENST00000309641 PTGS1P23219 599 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 NPY5RQ15761 445 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 ANO1Q5XXA6 986 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 ARMCX2Q7L311 632 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 SMARCC2Q8TAQ2 1214 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 RASGRP4Q8TDF6 673 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 ABHD8Q96I13 439 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 RMDN3Q96TC7 470 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 SLC5A4Q9NY91 659 aa10.46□□□□□ -0.74
PDE4D-201ENST00000309641 TRAF1Q13077 416 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
PDE4D-201ENST00000309641 ALG1Q9BT22 464 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 KATNBL1Q9H079 304 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 ZMYND12Q9H0C1 365 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 PXMP2Q9NR77 195 aa10.45□□□□□ -0.74
PDE4D-201ENST00000309641 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
PDE4D-201ENST00000309641 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
PDE4D-201ENST00000309641 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms