RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PHF20L1A8MW92 1017 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 MEIS2O14770 477 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 ATP1A3P13637 1013 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 GCFC2P16383 781 aaKnown RBP24■■□□□ 1.43
ATG4D-201ENST00000309469 FANCCQ00597 558 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 USH1GQ495M9 461 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 TBC1D10BQ4KMP7 808 aaPredicted RBP24■■□□□ 1.43
ATG4D-201ENST00000309469 MCTP2Q6DN12 878 aa24■■□□□ 1.43
ATG4D-201ENST00000309469 XPO4Q9C0E2 1151 aaKnown RBP24■■□□□ 1.43
ATG4D-201ENST00000309469 DDX25Q9UHL0 483 aaKnown RBP24■■□□□ 1.43
ATG4D-201ENST00000309469 AP3B2Q13367 1082 aa23.99■■□□□ 1.43
ATG4D-201ENST00000309469 PLIN2Q99541 437 aa23.99■■□□□ 1.43
ATG4D-201ENST00000309469 CUEDC2Q9H467 287 aa23.99■■□□□ 1.43
ATG4D-201ENST00000309469 TMEM266Q2M3C6 531 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 CCDC144BQ3MJ40 725 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 ANO3Q9BYT9 981 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 ASTN2O75129 1339 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-201ENST00000309469 PLCG1P19174 1290 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 USP11P51784 963 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 PDIA5Q14554 519 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 CHURC1Q8WUH1 139 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 MED15Q96RN5 788 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 MMTAG2Q9BU76 263 aaKnown RBP23.98■■□□□ 1.43
ATG4D-201ENST00000309469 KBTBD4Q9NVX7 518 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 RMND1Q9NWS8 449 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 HACL1Q9UJ83 578 aa23.98■■□□□ 1.43
ATG4D-201ENST00000309469 ZNF541Q9H0D2 1346 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 RPN1P04843 607 aaKnown RBP23.97■■□□□ 1.43
ATG4D-201ENST00000309469 MYL1P05976 194 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 CD44P16070 742 aaKnown RBP23.97■■□□□ 1.43
ATG4D-201ENST00000309469 TRAF1Q13077 416 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 ZYXQ15942 572 aaKnown RBP23.97■■□□□ 1.43
ATG4D-201ENST00000309469 LRRC15Q8TF66 581 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 GLIS2Q9BZE0 524 aaPredicted RBP23.97■■□□□ 1.43
ATG4D-201ENST00000309469 RAB34Q9BZG1 259 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 MAGEF1Q9HAY2 307 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 LRWD1Q9UFC0 647 aa23.97■■□□□ 1.43
ATG4D-201ENST00000309469 PPP1R3GB7ZBB8 358 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 PLA2G6O60733 806 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 KIF4BQ2VIQ3 1234 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 TRMT44Q8IYL2 757 aaKnown RBP23.96■■□□□ 1.43
ATG4D-201ENST00000309469 NFE2L3Q9Y4A8 694 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 CCDC84Q86UT8 332 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-201ENST00000309469 CALML4Q96GE6 196 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 DEFB129Q9H1M3 183 aa23.96■■□□□ 1.43
ATG4D-201ENST00000309469 SERPINC1P01008 464 aa23.95■■□□□ 1.42
ATG4D-201ENST00000309469 FOSP01100 380 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-201ENST00000309469 FAM160B2Q86V87 743 aa23.95■■□□□ 1.42
ATG4D-201ENST00000309469 SMYD4Q8IYR2 804 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-201ENST00000309469 HAS1Q92839 578 aa23.95■■□□□ 1.42
ATG4D-201ENST00000309469 P2RX7Q99572 595 aaKnown RBP23.95■■□□□ 1.42
ATG4D-201ENST00000309469 CYP3A7-CYP3A51PA0A087WV96 503 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 TAL1P17542 331 aaPredicted RBP23.94■■□□□ 1.42
ATG4D-201ENST00000309469 CYP3A7P24462 503 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 ZNF658Q5TYW1 1059 aaPredicted RBP23.94■■□□□ 1.42
ATG4D-201ENST00000309469 CRYGNQ8WXF5 182 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 KIFC2Q96AC6 838 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 RANBP17Q9H2T7 1088 aaKnown RBP23.94■■□□□ 1.42
ATG4D-201ENST00000309469 GINM1Q9NU53 330 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 FEM1BQ9UK73 627 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 H7C1D1 291 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 OPLAHO14841 1288 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 CBFA2T2O43439 604 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 ZNF18P17022 549 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 UBASH3AP57075 661 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 KLHL10Q6JEL2 608 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 FILIP1Q7Z7B0 1213 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
ATG4D-201ENST00000309469 SPDYE3A6NKU9 549 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 MARCH6O60337 910 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 OFD1O75665 1012 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 MOXD1Q6UVY6 613 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.93■■□□□ 1.42
ATG4D-201ENST00000309469 CACTINQ8WUQ7 758 aaKnown RBP23.93■■□□□ 1.42
ATG4D-201ENST00000309469 MBOAT7Q96N66 472 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 FEZ1Q99689 392 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 IMPACTQ9P2X3 320 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 PYCARDQ9ULZ3 195 aa23.93■■□□□ 1.42
ATG4D-201ENST00000309469 PIK3CDO00329 1044 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 CTNND1O60716 968 aaKnown RBP23.92■■□□□ 1.42
ATG4D-201ENST00000309469 ARHGAP4P98171 946 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 GRB10Q13322 594 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 KCNB1Q14721 858 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 SPATA1Q5VX52 437 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 TEX2Q8IWB9 1127 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 POTEMA6NI47 508 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 LRMPQ12912 555 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 SEMA3FQ13275 785 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 CCDC174Q6PII3 467 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 ARHGAP27Q6ZUM4 889 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 KIAA1524Q8TCG1 905 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 PCDHA12Q9UN75 941 aa23.92■■□□□ 1.42
ATG4D-201ENST00000309469 SYNRGQ9UMZ2 1314 aa23.91■■□□□ 1.42
ATG4D-201ENST00000309469 CDK11BP21127 795 aaKnown RBP23.91■■□□□ 1.42
ATG4D-201ENST00000309469 SREBF1P36956 1147 aa23.91■■□□□ 1.42
ATG4D-201ENST00000309469 NBPF12Q5TAG4 269 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-201ENST00000309469 KRT79Q5XKE5 535 aa23.91■■□□□ 1.42
ATG4D-201ENST00000309469 LRRC8AQ8IWT6 810 aa23.91■■□□□ 1.42
ATG4D-201ENST00000309469 PNMA5Q96PV4 448 aa23.91■■□□□ 1.42
ATG4D-201ENST00000309469 SAMSN1Q9NSI8 373 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms