RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MEIS1O00470 390 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 BACH1O14867 736 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 PRPF3O43395 683 aaKnown RBP14.06□□□□□ -0.16
RETREG3-201ENST00000309428 SERPINB2P05120 415 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 NAA25Q14CX7 972 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 ALX1Q15699 326 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 TRIM65Q6PJ69 517 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 DYDC1Q8WWB3 177 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 NOC4LQ9BVI4 516 aaKnown RBP14.06□□□□□ -0.16
RETREG3-201ENST00000309428 E7EVH7 732 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 DNAAF5Q86Y56 855 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 HSD3B7Q9H2F3 369 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 ZNF185O15231 689 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 CDK8P49336 464 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 WHAMMP3Q1A5X7 153 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 SMCR8Q8TEV9 937 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-201ENST00000309428 USP40Q9NVE5 1235 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 SMARCAL1Q9NZC9 954 aa14.06□□□□□ -0.16
RETREG3-201ENST00000309428 ESYT3A0FGR9 886 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 TDP2O95551 362 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 RBM26Q5T8P6 1007 aaKnown RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 CCDC121Q6ZUS5 278 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 ARPP21Q9UBL0 812 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L15C9J2P7 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L13C9JLJ4 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L11C9JVI0 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L18D6R9N7 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L22D6RA61 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L17D6RBQ6 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L19D6RCP7 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L20D6RJB6 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 LDHCP07864 332 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 ZNF76P36508 570 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 MAGEA9P43362 315 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L24Q0WX57 530 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 USP17L6PQ6QN14 398 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 MICALCLQ6ZW33 695 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 KRT26Q7Z3Y9 468 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 CPLX4Q7Z7G2 160 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 SNX29Q8TEQ0 813 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 MED15Q96RN5 788 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 ZBTB21Q9ULJ3 1066 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
RETREG3-201ENST00000309428 IFT88Q13099 833 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 CALML4Q96GE6 196 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 LRWD1Q9UFC0 647 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 XDHP47989 1333 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 MRC1P22897 1456 aa14.05□□□□□ -0.16
RETREG3-201ENST00000309428 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 RPSAP08865 295 aaKnown RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 CALML3P27482 149 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 WDR66Q8TBY9 1149 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 UBLCP1Q8WVY7 318 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 PNPLA7Q6ZV29 1317 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 SORBS3O60504 671 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 REXO1Q8N1G1 1221 aaKnown RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 UHMK1Q8TAS1 419 aaKnown RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 MFAP3LO75121 409 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 SH2D3CQ8N5H7 860 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-201ENST00000309428 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 SELENOSQ9BQE4 189 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 CD209Q9NNX6 404 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 ATP8A2Q9NTI2 1148 aa14.04□□□□□ -0.16
RETREG3-201ENST00000309428 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 DDX39AO00148 427 aaKnown RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 MAGEA1P43355 309 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 CCDC84Q86UT8 332 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 IFIH1Q9BYX4 1025 aaKnown RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 EHD4Q9H223 541 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 LUC7LQ9NQ29 371 aaKnown RBP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 FAM169AQ9Y6X4 670 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 TAF1P21675 1872 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 NONOQ15233 471 aaKnown RBP eCLIP14.03□□□□□ -0.16
RETREG3-201ENST00000309428 LLGL1Q15334 1064 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 IL17AQ16552 155 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 RRAGAQ7L523 313 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 MED4Q9NPJ6 270 aa14.03□□□□□ -0.16
RETREG3-201ENST00000309428 CYTH3O43739 400 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms