RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 TDP2O95551 362 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 UBA7P41226 1012 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 KRT26Q7Z3Y9 468 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 TAF1DQ9H5J8 278 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 CBX8Q9HC52 389 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 DDX25Q9UHL0 483 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 PNMA2Q9UL42 364 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 FZD1Q9UP38 647 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 A0A087X0B3 334 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 ADM5C9JUS6 153 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 USP2O75604 605 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 ICAM1P05362 532 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 FDX1P10109 184 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 NLRP12P59046 1061 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 EAPPQ56P03 285 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 MTMR9Q96QG7 549 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 RAB34Q9BZG1 259 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 CCSER1Q9C0I3 900 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 RPAP3Q9H6T3 665 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 CCDC39Q9UFE4 941 aa17.78■□□□□ 0.44
HERPUD1-201ENST00000300302 IQCA1LA6NCM1 817 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 OPLAHO14841 1288 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 FLOT1O75955 427 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 MOXD1Q6UVY6 613 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 LDHDQ86WU2 507 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 RASSF8Q8NHQ8 419 aa17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.43
HERPUD1-201ENST00000300302 MYH7BA7E2Y1 1941 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 SLC37A4O43826 429 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 EDIL3O43854 480 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 SMC2O95347 1197 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 POLR2MP0CAP2 368 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 NF2P35240 595 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 TXKP42681 527 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 PRKG1Q13976 671 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 LUZP1Q86V48 1076 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 SMARCE1Q969G3 411 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 C12orf42Q96LP6 360 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 PPP1R9BQ96SB3 815 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 PPP1R9AQ9ULJ8 1098 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 PCDHA5Q9Y5H7 936 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 CSADQ9Y600 493 aa17.76■□□□□ 0.43
HERPUD1-201ENST00000300302 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 BIN1O00499 593 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 MARCH6O60337 910 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 CFBP00751 764 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 CYP3A7P24462 503 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 SREBF1P36956 1147 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 TECP42680 631 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 FXR2P51116 673 aaKnown RBP eCLIP17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 E2F4Q16254 413 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 C11orf57Q6ZUT1 292 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 DISC1Q9NRI5 854 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 GOLGA6L19H0YKK7 550 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 FOXN1O15353 648 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 HOXA13P31271 388 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 STAT6P42226 847 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 DGKZQ13574 1117 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 PDIA5Q14554 519 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 NT5DC1Q5TFE4 455 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 IGSF22Q8N9C0 903 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 RBM46Q8TBY0 533 aaKnown RBP17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 CRYGNQ8WXF5 182 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 PAGE5Q96GU1 130 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 BPIFA3Q9BQP9 254 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 SLC38A10Q9HBR0 1119 aa17.75■□□□□ 0.43
HERPUD1-201ENST00000300302 SCN4AP35499 1836 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 PHIPQ8WWQ0 1821 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 BECN2A8MW95 431 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 ZBED4O75132 1171 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 TAL1P17542 331 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 CDC25AP30304 524 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 HMGCS2P54868 508 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 KARSQ15046 597 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 DPCR1Q3MIW9 517 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 SH3RF1Q7Z6J0 888 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 CABP7Q86V35 215 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 TRIML1Q8N9V2 468 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 AFG3L2Q9Y4W6 797 aa17.74■□□□□ 0.43
HERPUD1-201ENST00000300302 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 VGLL4Q14135 290 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 MCF2L2Q86YR7 1114 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 AGBL1Q96MI9 1066 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 MBOAT7Q96N66 472 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 CUEDC2Q9H467 287 aa17.73■□□□□ 0.43
HERPUD1-201ENST00000300302 LRWD1Q9UFC0 647 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms