RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 KIF9Q9HAQ2 790 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 KLHL14Q9P2G3 628 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 AKT3Q9Y243 479 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PHKG2P15735 406 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CDC25AP30304 524 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SERPINB6P35237 376 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 OSTNP61366 133 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TRIP13Q15645 432 aaPredicted RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF589Q86UQ0 364 aaPredicted RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GRK7Q8WTQ7 553 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 HOXB7P09629 217 aa14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PDE6BP35913 854 aa14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PPP1R13BQ96KQ4 1090 aa14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 BEGAINQ9BUH8 593 aa14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CDCA7Q9BWT1 371 aaPredicted RBP14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 NUCKS1Q9H1E3 243 aaKnown RBP14.83□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CLTAP09496 248 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GPR101Q96P66 508 aaPredicted RBP14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ARHGEF10O15013 1369 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 COPB1P53618 953 aaKnown RBP14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ARPP19P56211 112 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MAP7Q14244 749 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PI4K2BQ8TCG2 481 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GOLGA8KD6RF30 607 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PRKAB2O43741 272 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PPP2R5BQ15173 497 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ABCB5Q2M3G0 1257 aa14.83□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ANTXR1Q9H6X2 564 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SULF1Q8IWU6 871 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DBNDD1Q9H9R9 158 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SEC31BQ9NQW1 1179 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TPX2Q9ULW0 747 aaKnown RBP14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PCDHA1Q9Y5I3 950 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 EXOC3L4Q17RC7 722 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MMEL1Q495T6 779 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HACE1Q8IYU2 909 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CFAP61Q8NHU2 1237 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MOCS3O95396 460 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TMTC4Q5T4D3 741 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RYBPQ8N488 228 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SPDL1Q96EA4 605 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GOLGA8SH3BPF8 625 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 GBP5Q96PP8 586 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ZKSCAN8Q15776 578 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MYLK4Q86YV6 388 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 COA7Q96BR5 231 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RAB3IPQ96QF0 476 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ADPGKQ9BRR6 497 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CMA1P23946 247 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 LRCH2Q5VUJ6 765 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PDZD8Q8NEN9 1154 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FAM71BQ8TC56 605 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ZNF577Q9BSK1 485 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 BABAM1Q9NWV8 329 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CYP2D7A0A087X1C5 515 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 A6NJR5 290 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HESX1Q9UBX0 185 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SMIM24O75264 130 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CCDC51Q96ER9 411 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 USH1CQ9Y6N9 552 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ABCC10Q5T3U5 1492 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 NSFP46459 744 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MRPS25P82663 173 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 UBE2SQ16763 222 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FAM26FQ5R3K3 315 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 BCAS4Q8TDM0 211 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 TBK1Q9UHD2 729 aa14.81□□□□□ -0.04
CHRFAM7A-201ENST00000299847 FTCDO95954 541 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MX2P20592 715 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RASSF2P50749 326 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 NKX1-1Q15270 411 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HAUS2Q9NVX0 235 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PPFIA4O75335 1185 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SPATA1Q5VX52 437 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 LSG1Q9H089 658 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 MRPL46Q9H2W6 279 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 HNRNPDLO14979 420 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 RPSAP08865 295 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 SLCO1A2P46721 670 aa14.8□□□□□ -0.04
CHRFAM7A-201ENST00000299847 CCT5P48643 541 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms