RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CAPZA3Q96KX2 299 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 SUGCTQ9HAC7 445 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 NT5DC1Q5TFE4 455 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 TRIML1Q8N9V2 468 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 ANKRD20A12PQ8NF67 263 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 PARD6BQ9BYG5 372 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 ADGRG1Q9Y653 693 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 ECM29Q5VYK3 1845 aa15.16■□□□□ 0.02
TTC39B-201ENST00000297615 E9PMD0 336 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PLS1Q14651 629 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 SRGAP2O75044 1071 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PHACTR2O75167 634 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 ECE1P42892 770 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 COPB1P53618 953 aaKnown RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 ECM1Q16610 540 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 ANKRD40Q6AI12 368 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 GTPBP4Q9BZE4 634 aaKnown RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 EXOC1Q9NV70 894 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 FHOD1Q9Y613 1164 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 DUSP10Q9Y6W6 482 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 SHTN1A0MZ66 631 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 MFAP3LO75121 409 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 H2AFXP16104 143 aaPredicted RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PRAMEF18Q5VWM3 479 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PRMT6Q96LA8 375 aaPredicted RBP15.15■□□□□ 0.02
TTC39B-201ENST00000297615 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 PCDHA1Q9Y5I3 950 aa15.15■□□□□ 0.02
TTC39B-201ENST00000297615 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 ZMYND10O75800 440 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 GH2P01242 217 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 TRIM21P19474 475 aaKnown RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 GNAQP50148 359 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 PPP4CP60510 307 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 APTXQ7Z2E3 356 aaKnown RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 FGFBP2Q9BYJ0 223 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 DDX39AO00148 427 aaKnown RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 PLEKP08567 350 aaPredicted RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 IL1R1P14778 569 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 SHMT1P34896 483 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 ADCY7P51828 1080 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 ERVK-24P63145 666 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 TERF2Q15554 542 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 CERKLQ49MI3 558 aaPredicted RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 PRR16Q569H4 304 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 NCAPH2Q6IBW4 605 aa15.14■□□□□ 0.01
TTC39B-201ENST00000297615 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
TTC39B-201ENST00000297615 TTC26A0AVF1 554 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 MACROD2A1Z1Q3 448 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
TTC39B-201ENST00000297615 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 PSTPIP2Q9H939 334 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 HOMER2Q9NSB8 354 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 DUOX1Q9NRD9 1551 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 ZBTB39O15060 712 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 ECE2O60344 883 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 SASH3O75995 380 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 CHMP4BP1P59074 171 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 TBC1D8BQ0IIM8 1120 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 TCP11X2Q5H9J9 407 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 SH3RF1Q7Z6J0 888 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 MAGEC2Q9UBF1 373 aaPredicted RBP15.13■□□□□ 0.01
TTC39B-201ENST00000297615 MRFAP1Q9Y605 127 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 HLA-DOAP06340 250 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 GNA11P29992 359 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 PLA2G4AP47712 749 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 SPATA20Q8TB22 786 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 KIAA1024Q9UPX6 916 aa15.13■□□□□ 0.01
TTC39B-201ENST00000297615 AHDC1Q5TGY3 1603 aaPredicted RBP15.12■□□□□ 0.01
TTC39B-201ENST00000297615 MYMKA6NI61 221 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 CFBP00751 764 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
TTC39B-201ENST00000297615 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
TTC39B-201ENST00000297615 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 IRF2BP1Q8IU81 584 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 KIFC2Q96AC6 838 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 CTAGE1Q96RT6 745 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 ZBTB21Q9ULJ3 1066 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
TTC39B-201ENST00000297615 H0YIN7 160 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 TTLL1O95922 423 aa15.12■□□□□ 0.01
TTC39B-201ENST00000297615 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms