RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
RHO-201ENST00000296271 SEPT2Q15019 361 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 TTI2Q6NXR4 508 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 ZNF446Q9NWS9 450 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 SLX4Q8IY92 1834 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 PRPHP41219 470 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 LRRC41Q15345 812 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 RMND1Q9NWS8 449 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 LRWD1Q9UFC0 647 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 MYH4Q9Y623 1939 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 TTC26A0AVF1 554 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 ECE2O60344 883 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 KRT9P35527 623 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 ASPRV1Q53RT3 343 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 HAS1Q92839 578 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 SLF1Q9BQI6 1058 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 ABHD10Q9NUJ1 306 aa13.22□□□□□ -0.29
RHO-201ENST00000296271 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
RHO-201ENST00000296271 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 MYH7BA7E2Y1 1941 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
RHO-201ENST00000296271 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
RHO-201ENST00000296271 CASQ1P31415 396 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 PDE6BP35913 854 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 SYCP1Q15431 976 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 ARHGAP29Q52LW3 1261 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.3
RHO-201ENST00000296271 DACT2Q5SW24 774 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 FGFBP2Q9BYJ0 223 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 POLD4Q9HCU8 107 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 AGPAT5Q9NUQ2 364 aa13.21□□□□□ -0.3
RHO-201ENST00000296271 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 LAD1O00515 517 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 CCDC175P0C221 793 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 IDEP14735 1019 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 STAT3P40763 770 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 KCNB1Q14721 858 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 ZNF507Q8TCN5 953 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
RHO-201ENST00000296271 ST7Q9NRC1 585 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 EXOC1Q9NV70 894 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 NPHP3-ACAD11A0A0J9YXS1 232 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 H7C1D1 291 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 USH1GQ495M9 461 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
RHO-201ENST00000296271 REXO2Q9Y3B8 237 aaKnown RBP13.2□□□□□ -0.3
RHO-201ENST00000296271 ESYT2A0FGR8 921 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 PSMA7O14818 248 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 P2RX5Q93086 422 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 ZBTB5O15062 677 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 TADA3O75528 432 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
RHO-201ENST00000296271 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 WDR59Q6PJI9 974 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CCDC155Q8N6L0 562 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
RHO-201ENST00000296271 AK8Q96MA6 479 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
RHO-201ENST00000296271 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms