RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.79□□□□□ -0.04
HPS3-201ENST00000296051 MMP1P03956 469 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 LLGL1Q15334 1064 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 OXER1Q8TDS5 423 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 CCPG1Q9ULG6 757 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 HYOU1Q9Y4L1 999 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 A0A1B0GUA9 196 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 N4BP1O75113 896 aaKnown RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 PPP1R7Q15435 360 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 TPH2Q8IWU9 490 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 RSRC1Q96IZ7 334 aaKnown RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 MRPL44Q9H9J2 332 aaKnown RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 SERPINB13Q9UIV8 391 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 SH2B2O14492 632 aaPredicted RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 GTPBP6O43824 516 aaPredicted RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 GAS7O60861 476 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 EEF2P13639 858 aaKnown RBP14.78□□□□□ -0.04
HPS3-201ENST00000296051 TRIM49BA6NDI0 452 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 ICE2Q659A1 982 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 LMBR1Q8WVP7 490 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 MRFAP1Q9Y605 127 aa14.78□□□□□ -0.04
HPS3-201ENST00000296051 A0A087WUV0 522 aaPredicted RBP14.77□□□□□ -0.04
HPS3-201ENST00000296051 CSPG5O95196 566 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 MOCS3O95396 460 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.04
HPS3-201ENST00000296051 CYB5R4Q7L1T6 521 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 CEP83Q9Y592 693 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 PPFIA4O75335 1185 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 CLTAP09496 248 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 ABCB4P21439 1286 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 Q3C1V9 767 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 USP49Q70CQ1 688 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 KRT25Q7Z3Z0 450 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.04
HPS3-201ENST00000296051 FBXO11Q86XK2 927 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 CCDC117Q8IWD4 279 aaPredicted RBP14.77□□□□□ -0.04
HPS3-201ENST00000296051 CCDC26Q8TAB7 109 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 PAGE5Q96GU1 130 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 PSTPIP2Q9H939 334 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 STK38LQ9Y2H1 464 aa14.77□□□□□ -0.04
HPS3-201ENST00000296051 CHRNA5P30532 468 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 GGCXP38435 758 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.05
HPS3-201ENST00000296051 FMR1Q06787 632 aaKnown RBP eCLIP14.77□□□□□ -0.052e-10■■■■■ 37.1
HPS3-201ENST00000296051 RESP18Q5W5W9 173 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.05
HPS3-201ENST00000296051 TBC1D10CQ8IV04 446 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 LRRC45Q96CN5 670 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 CNOT6LQ96LI5 555 aaKnown RBP14.77□□□□□ -0.05
HPS3-201ENST00000296051 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 IGBP1P78318 339 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 PLCB3Q01970 1234 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 PEX26Q7Z412 305 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 EFCAB13Q8IY85 973 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 FRMD4BQ9Y2L6 1034 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 ABCA6Q8N139 1617 aa14.77□□□□□ -0.05
HPS3-201ENST00000296051 LPXNO60711 386 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 FTCDO95954 541 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 IFNAR2P48551 515 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 TRPC3Q13507 836 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 ASIC2Q16515 512 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 SFMBT2Q5VUG0 894 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 TBC1D9BQ66K14 1250 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 C2orf69Q8N8R5 385 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 MICAL1Q8TDZ2 1067 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 DNM3Q9UQ16 869 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 PCDHA1Q9Y5I3 950 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 HEXIM1O94992 359 aaKnown RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 PEX19P40855 299 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 MAGEA9P43362 315 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 POLR2FP61218 127 aaKnown RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 LRRC41Q15345 812 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 RUFY4Q6ZNE9 571 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 PANX2Q96RD6 677 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 ZSCAN10Q96SZ4 725 aaPredicted RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 FEZ2Q9UHY8 353 aaPredicted RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 MRPL11Q9Y3B7 192 aaKnown RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 TULP4Q9NRJ4 1543 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 IFNAR1P17181 557 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 TCP1P17987 556 aaKnown RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 ST3GAL1Q11201 340 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 COL9A3Q14050 684 aaPredicted RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 PRR16Q569H4 304 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
HPS3-201ENST00000296051 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
HPS3-201ENST00000296051 ESYT3A0FGR9 886 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 SCARF1Q14162 830 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 SLC27A3Q5K4L6 730 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 BLIDQ8IZY5 108 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 CALCRLQ16602 461 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 AOC3Q16853 763 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 FHOD1Q9Y613 1164 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 KRT19P08727 400 aa14.75□□□□□ -0.05
HPS3-201ENST00000296051 PTPREP23469 700 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms